1 HisKA#1
454-520 aa · 67 aa · 10.0% of protein
Raw token
HisKA:454:1.22e-17:520:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
NE604_RS11375
Histidine kinase, Classic
Anaerofustis stercorihominis · GCF_024460395
ClassHKTypeClassicLength672 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_024460395#NE604_RS11375Stable P2CS identifier used across views.
GenomeGCF_024460395Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length672 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 672 aa (23.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa672 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
565-656 aa · 92 aa · 13.7% of protein
Raw token
HATPase_c:565:0.00000000000278:656:97:109- Raw architecture: HisKA:454:1.22e-17:520:67:64#HATPase_c:565:0.00000000000278:656:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_024460395::NZ_JANFYI010000230.1::G00014
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span355005-357699Genomic interval covered by the local TCS group.
Identifiers
Old locus tagNE604_11375RefSeq proteinWP_007050186.1
Context group ID
GCF_024460395::NZ_JANFYI010000230.1::G00014Context members
NE604_RS11370NE604_RS11375
Partner locus tags
NE604_RS11370NE604_RS11375
Partner old locus tags
NE604_11370NE604_11375
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007050186.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E3E0Y6Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E3E0Y6_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagNE604_RS11375Primary locus identifier stored in the genes table.
Old locus tagNE604_11375Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JANFYI010000230.1Sequence record reported by the local genomic context database.
Genomic interval355 681-357 699 nt2 019 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span355 005-357 699 ntGCF_024460395::NZ_JANFYI010000230.1::G00014
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_024460395::NZ_JANFYI010000230.1::G00014Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JANFYI010000230.1All displayed genes belong to this local TCS context.
Neighborhood span355 005-357 699 nt2 695 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
355 005 nt357 699 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
NE604_RS11370GCF_024460395#NE604_RS11370
RROmpR
355 005-355 706 nt · Forward (+)
NE604_RS11375GCF_024460395#NE604_RS11375
HKClassicCurrent focus
355 681-357 699 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS06495Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0838891
Simplified PFAM architecture for HKOC_0838891
PFAM domain coverage: 157 / 672 aa (23.4%)
1 aa672 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[454-520] | HATPase_c[566-655]
- Domain count: 2
- Matched identifier: HKOC_0838891
- Positioned domains: HisKA 454-520 ; HATPase_c 566-655
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS06495
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_024460395
AssemblyASM2446039v1 · Contighaploid
Genome composition2 407 739 bp · 34,0% GCAnaerofustis stercorihominis
Signal transduction countsGenes 40 · HK 24 · RR 15CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key