P2CS-Web
Two-component systems, rebuilt for exploration
Browse genomes
Genome-first entry point for species, lineage, and taxonomic selection.
This page now prefers a precomputed Krona view when it is available, while keeping the live URL-based taxonomy controls as fallback.
Current focus
The precomputed Krona panel, live taxonomy fallback, and genome table stay aligned where applicable.
No free-text search applied.
No taxonomy filter applied yet.
Total genomes returned: 392075
Krona export not generated
The page keeps the live taxonomy fallback until the offline export has been prepared.
Run `apps/api/.venv/bin/python scripts/krona/export_genome_taxonomy.py` once to write the TSV into `DATAS/KRONA` and generate the HTML automatically if `ktImportText` is installed.
Krona-like taxonomy wheel
Concentric overview of the current browse scope. Click a sector to refine the genome selection.
No taxonomy filter yet. The wheel summarizes the current browse scope.
Grey segments aggregate lower-abundance values for: phylum. Use the textual selector below for exact navigation.
Superkingdom
Superkingdom
- Bacteria391017
- None1058
Kingdom
Kingdom
- Pseudomonadati239529
- Bacillati149968
- None1058
- Fusobacteriati771
- Thermotogati687
- None62
Phylum
Phylum
- Pseudomonadota204672
- Bacillota104489
- Actinomycetota43223
- Bacteroidota18939
- Campylobacterota10608
- Spirochaetota2115
- Cyanobacteriota1937
- None1058
- Fusobacteriota771
- Thermodesulfobacteriota742
- Verrucomicrobiota576
- Chlamydiota538
- Other 502407
Precise taxonomy selector
Exact rank-by-rank filtering, kept as a textual fallback under the radial overview.
Commence par le niveau taxonomique externe, puis affine la navigation rang par rang.
Superkingdom
Superkingdom
Kingdom
Kingdom
Phylum
Phylum
Pseudomonadota204672Bacillota104489Actinomycetota43223Bacteroidota18939Campylobacterota10608Spirochaetota2115Cyanobacteriota1937None1058Fusobacteriota771Thermodesulfobacteriota742Verrucomicrobiota576Chlamydiota538Deinococcota387Planctomycetota253Myxococcota233Chloroflexota214Thermotogota169Rhodothermota148Acidobacteriota133Synergistota131Fibrobacterota94Bdellovibrionota91Mycoplasmatota84Aquificota55Gemmatimonadota51Chlorobiota48Balneolota47Nitrospirota43Candidatus Saccharibacteria27Lentisphaerota25Deferribacterota22None19Armatimonadota15Ignavibacteriota13Candidatus Kryptoniota12Thermomicrobiota11Kiritimatiellota8Candidatus Cryosericota7Elusimicrobiota7Atribacterota6Dictyoglomota6Candidatus Binatota5Chrysiogenota4Coprothermobacterota4Nitrospinota4Candidatus Dormiibacterota3Candidatus Deferrimicrobiota3Candidatus Methylomirabilota3Thermodesulfobiota3Candidatus Melainabacteria2Candidatus Absconditibacteriota2Candidatus Fervidibacterota2Calditrichota2Candidatus Cloacimonadota2Candidatus Tectimicrobiota2Vulcanimicrobiota1Candidatus Bipolaricaulota1Abditibacteriota1Caldisericota1Candidatus Omnitrophota1Fidelibacterota1Thermosulfidibacterota1
Genome table
Top genomes from the current browse scope (392075 rows)
| Genome | Taxonomy / assembly | Counts / genome | Genome page |
|---|---|---|---|
| GCF_035638955 Genome name: Oligoflexus sp. Strain: SMAG_U11078 SAMN37946555 · PRJNA224116 | Unknown Contig Assembly: ASM3563895v1 | Genes 543 / HK 367 / RR 161 / PP 15 9 989 913 bp · 52,0% GC | Open genome |
| GCF_003386235 Genome name: Cohnella phaseoli Strain: CECT 7287 SAMN09074745 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: ASM338623v1 | Genes 524 / HK 263 / RR 259 / PP 2 9 401 845 bp · 53,5% GC | Open genome |
| GCF_040392865 Genome name: Cohnella sp. Strain: T2.bin.247 SAMN39477497 · PRJNA224116 | Unknown Contig Assembly: ASM4039286v1 | Genes 515 / HK 257 / RR 255 / PP 3 8 678 572 bp · 54,0% GC | Open genome |
| GCF_001896145 Genome name: Archangium sp. Cb G35 Strain: Cb G35 SAMN06020410 · PRJNA224116 | Unknown Contig Assembly: ASM189614v1 | Genes 487 / HK 314 / RR 169 / PP 4 12 927 638 bp · 69,0% GC | Open genome |
| GCF_033547035 Genome name: Archangium violaceum Strain: KYC5002 SAMN37852368 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM3354703v1 | Genes 487 / HK 313 / RR 170 / PP 4 13 249 988 bp · 69,0% GC | Open genome |
| GCF_016887565 Genome name: Archangium violaceum Strain: SDU8 SAMN17804988 · PRJNA224116 | Unknown Complete Genome Assembly: ASM1688756v1 | Genes 483 / HK 312 / RR 166 / PP 5 13 213 980 bp · 69,0% GC | Open genome |
| GCF_017671885 Genome name: Cohnella sp. LGH Strain: LGH SAMN18354433 · PRJNA224116 | Unknown Complete Genome Assembly: ASM1767188v1 | Genes 482 / HK 239 / RR 239 / PP 4 8 896 274 bp · 53,5% GC | Open genome |
| GCF_042865265 Genome name: Archangium violaceum Strain: scpoplar1 SAMN43033833 · PRJNA224116 | Unknown Contig Assembly: ASM4286526v1 | Genes 482 / HK 310 / RR 169 / PP 3 13 446 571 bp · 68,5% GC | Open genome |
| GCF_020103695 Genome name: Hyalangium versicolor Strain: H56D21 SAMN20309866 · PRJNA224116 | Unknown Scaffold · reference genome Assembly: ASM2010369v1 | Genes 475 / HK 284 / RR 185 / PP 6 13 559 219 bp · 67,0% GC | Open genome |
| GCF_003387095 Genome name: Archangium gephyra Strain: DSM 2261 SAMN04488083 · PRJNA224116 | Unknown Scaffold Assembly: ASM338709v1 | Genes 473 / HK 307 / RR 161 / PP 5 12 433 659 bp · 69,5% GC | Open genome |
| GCF_001027285 Genome name: Archangium gephyra Strain: DSM 2261 SAMN03704078 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM102728v1 | Genes 470 / HK 304 / RR 160 / PP 6 12 489 432 bp · 69,5% GC | Open genome |
| GCF_044360545 Genome name: Archangium violaceum Strain: Cbvi 34 SAMN12649482 · PRJNA224116 | Unknown Complete Genome Assembly: ASM4436054v1 | Genes 466 / HK 299 / RR 162 / PP 5 13 332 545 bp · 67,5% GC | Open genome |
| GCF_004307995 Genome name: Paenibacillus thalictri Strain: N2SHLJ1 SAMN10962218 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM430799v1 | Genes 464 / HK 238 / RR 226 / PP 0 9 419 252 bp · 51,0% GC | Open genome |
| GCF_003044305 Genome name: Vitiosangium sp. GDMCC 1.1324 Strain: GDMCC 1.1324 SAMN08798667 · PRJNA224116 | Unknown Contig Assembly: ASM304430v1 | Genes 462 / HK 286 / RR 171 / PP 5 14 076 305 bp · 68,5% GC | Open genome |
| GCF_024623785 Genome name: Archangium lipolyticum Strain: CY-1 SAMN30160696 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM2462378v1 | Genes 457 / HK 295 / RR 157 / PP 5 12 594 933 bp · 68,5% GC | Open genome |
| GCF_044360475 Genome name: Archangium minus Strain: Cbm 6 SAMN12649481 · PRJNA224116 | Unknown Complete Genome · reference genome Assembly: ASM4436047v1 | Genes 457 / HK 293 / RR 158 / PP 6 13 217 192 bp · 67,5% GC | Open genome |
| GCF_026626635 Genome name: Archangium lansinium Strain: MIWBW SAMN31786599 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM2662663v1 | Genes 455 / HK 288 / RR 164 / PP 3 13 831 693 bp · 68,0% GC | Open genome |
| GCF_000733295 Genome name: Archangium violaceum Cb vi76 Strain: Cb vi76 SAMN02910210 · PRJNA224116 | Unknown Contig Assembly: ASM73329v1 | Genes 454 / HK 282 / RR 167 / PP 5 12 537 762 bp · 69,0% GC | Open genome |
| GCF_042230915 Genome name: Archangium gephyra Strain: SDU49 SAMN30160214 · PRJNA224116 | Unknown Complete Genome Assembly: ASM4223091v1 | Genes 451 / HK 289 / RR 158 / PP 4 11 964 604 bp · 70,0% GC | Open genome |
| GCF_000335475 Genome name: Cystobacter fuscus DSM 2262 Strain: DSM 2262 SAMN02470006 · PRJNA224116 | Unknown Contig · reference genome Assembly: ASM33547v2 | Genes 445 / HK 288 / RR 153 / PP 4 12 282 374 bp · 68,5% GC | Open genome |