1 HisKA#1
1-59 aa · 59 aa · 25.3% of protein
Raw token
HisKA:1:0.00000000000000212:59:59:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
NE604_RS09315
Histidine kinase, Classic
Anaerofustis stercorihominis · GCF_024460395
ClassHKTypeClassicLength233 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_024460395#NE604_RS09315Stable P2CS identifier used across views.
GenomeGCF_024460395Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length233 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage177 / 233 aa (76.0%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa233 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
107-224 aa · 118 aa · 50.6% of protein
Raw token
HATPase_c:107:1.21e-29:224:119:109- Raw architecture: HisKA:1:0.00000000000000212:59:59:64#HATPase_c:107:1.21e-29:224:119:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_024460395::NZ_JANFYI010000229.1::G00018
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span67899-69393Genomic interval covered by the local TCS group.
Identifiers
Old locus tagNE604_09315RefSeq proteinWP_256146737.1
Context group ID
GCF_024460395::NZ_JANFYI010000229.1::G00018Context members
NE604_RS09310NE604_RS09315
Partner locus tags
NE604_RS09310NE604_RS09315
Partner old locus tags
NE604_09310NE604_09315
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_256146737.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagNE604_RS09315Primary locus identifier stored in the genes table.
Old locus tagNE604_09315Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JANFYI010000229.1Sequence record reported by the local genomic context database.
Genomic interval68 692-69 393 nt702 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span67 899-69 393 ntGCF_024460395::NZ_JANFYI010000229.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_024460395::NZ_JANFYI010000229.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JANFYI010000229.1All displayed genes belong to this local TCS context.
Neighborhood span67 899-69 393 nt1 495 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
67 899 nt69 393 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
NE604_RS09310GCF_024460395#NE604_RS09310
RRFrzZ
67 899-68 657 nt · Reverse (-)
NE604_RS09315GCF_024460395#NE604_RS09315
HKClassicCurrent focus
68 692-69 393 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_959026055#Q5Q95_RS04780Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1373584
Simplified PFAM architecture for HKOC_1373584
PFAM domain coverage: 184 / 526 aa (35.0%)
1 aa526 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[286-352] | HATPase_c[400-516]
- Domain count: 2
- Matched identifier: HKOC_1373584
- Positioned domains: HisKA 286-352 ; HATPase_c 400-516
Cluster members and taxonomy
Representative gene: GCF_959026055#Q5Q95_RS04780
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 214 853 · GCF_024460395
AssemblyASM2446039v1 · Contighaploid
Genome composition2 407 739 bp · 34,0% GCAnaerofustis stercorihominis
Signal transduction countsGenes 40 · HK 24 · RR 15CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key