1 HisKA#1
94-153 aa · 60 aa · 19.2% of protein
Raw token
HisKA:94:0.00000000000000222:153:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
RO865_RS01970
Histidine kinase, Classic
Blautia faecis · GCF_032142815
ClassHKTypeClassicLength312 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_032142815#RO865_RS01970Stable P2CS identifier used across views.
GenomeGCF_032142815Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length312 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage170 / 312 aa (54.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
199-308 aa · 110 aa · 35.3% of protein
Raw token
HATPase_c:199:2.58e-24:308:110:109- Raw architecture: HisKA:94:0.00000000000000222:153:61:64#HATPase_c:199:2.58e-24:308:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_032142815::NZ_JAVSND010000001.1::G00005
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span398591-400221Genomic interval covered by the local TCS group.
Identifiers
Old locus tagRO865_01970RefSeq proteinWP_313717941.1
Context group ID
GCF_032142815::NZ_JAVSND010000001.1::G00005Context members
RO865_RS01965RO865_RS01970
Partner locus tags
RO865_RS01965RO865_RS01970
Partner old locus tags
RO865_01965RO865_01970
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_313717941.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagRO865_RS01970Primary locus identifier stored in the genes table.
Old locus tagRO865_01970Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAVSND010000001.1Sequence record reported by the local genomic context database.
Genomic interval399 283-400 221 nt939 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span398 591-400 221 ntGCF_032142815::NZ_JAVSND010000001.1::G00005
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_032142815::NZ_JAVSND010000001.1::G00005Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAVSND010000001.1All displayed genes belong to this local TCS context.
Neighborhood span398 591-400 221 nt1 631 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
398 591 nt400 221 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
RO865_RS01965GCF_032142815#RO865_RS01965
RROmpR
398 591-399 286 nt · Forward (+)
RO865_RS01970GCF_032142815#RO865_RS01970
HKClassicCurrent focus
399 283-400 221 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_032142815#RO865_RS01970The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2876167
Simplified PFAM architecture for HKOC_2876167
PFAM domain coverage: 171 / 312 aa (54.8%)
1 aa312 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[93-153] | HATPase_c[199-308]
- Domain count: 2
- Matched identifier: HKOC_2876167
- Positioned domains: HisKA 93-153 ; HATPase_c 199-308
Cluster members and taxonomy
Representative gene: GCF_032142815#RO865_RS01970
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_032142815
AssemblyASM3214281v1 · Scaffoldhaploid
Genome composition4 808 166 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 129 · HK 65 · RR 63CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key