1 HisKA#1
22-72 aa · 51 aa · 22.3% of protein
Raw token
HisKA:22:0.00000321:72:51:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
RO865_RS00165
Histidine kinase, Classic
Blautia faecis · GCF_032142815
ClassHKTypeClassicLength229 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_032142815#RO865_RS00165Stable P2CS identifier used across views.
GenomeGCF_032142815Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length229 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage157 / 229 aa (68.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Biotite-like viewServer-side Python rendering inspired by the Biotite sigma-domain example.
Domain-by-domain annotation2 items
2 HATPase_c#2
121-226 aa · 106 aa · 46.3% of protein
Raw token
HATPase_c:121:1.09e-29:226:109:109- Raw architecture: HisKA:22:0.00000321:72:51:64#HATPase_c:121:1.09e-29:226:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_032142815::NZ_JAVSND010000001.1::G00002
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span35320-36009Genomic interval covered by the local TCS group.
Identifiers
Old locus tagRO865_00165RefSeq proteinWP_148462200.1
Context group ID
GCF_032142815::NZ_JAVSND010000001.1::G00002Context members
RO865_RS00165
Partner locus tags
RO865_RS00165
Partner old locus tags
RO865_00165
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_148462200.1Primary protein accession used for annex mappings.
UniProt accessionA0ABX2H6A8Primary UniProt accession resolved in the annex database.
UniProt IDA0ABX2H6A8_9FIRMDisplay identifier provided by UniProt.
GO / PubMed0 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagRO865_RS00165Primary locus identifier stored in the genes table.
Old locus tagRO865_00165Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAVSND010000001.1Sequence record reported by the local genomic context database.
Genomic interval35 320-36 009 nt690 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span35 320-36 009 ntGCF_032142815::NZ_JAVSND010000001.1::G00002
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_032142815::NZ_JAVSND010000001.1::G00002Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAVSND010000001.1All displayed genes belong to this local TCS context.
Neighborhood span35 320-36 009 nt690 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
35 320 nt36 009 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
RO865_RS00165GCF_032142815#RO865_RS00165
HKClassicCurrent focus
35 320-36 009 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013300155#G4470_RS03360Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2926358
Simplified PFAM architecture for HKOC_2926358
PFAM domain coverage: 105 / 229 aa (45.9%)
1 aa229 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[121-225]
- Domain count: 1
- Matched identifier: HKOC_2926358
- Positioned domains: HATPase_c 121-225
Cluster members and taxonomy
Representative gene: GCF_013300155#G4470_RS03360
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_032142815
AssemblyASM3214281v1 · Scaffoldhaploid
Genome composition4 808 166 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 129 · HK 65 · RR 63CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key