1 HisKA#1
139-203 aa · 65 aa · 18.0% of protein
Raw token
HisKA:139:0.00000000000806:203:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD81_RS15455
Histidine kinase, Classic
Blautia obeum · GCF_003436075
ClassHKTypeClassicLength362 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003436075#DXD81_RS15455Stable P2CS identifier used across views.
GenomeGCF_003436075Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length362 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 362 aa (48.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa362 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
253-361 aa · 109 aa · 30.1% of protein
Raw token
HATPase_c:253:1.12e-22:361:110:109- Raw architecture: HisKA:139:0.00000000000806:203:65:64#HATPase_c:253:1.12e-22:361:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003436075::NZ_QSOL01000017.1::G00027
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span18202-19975Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD81_15465RefSeq proteinWP_117639905.1
Context group ID
GCF_003436075::NZ_QSOL01000017.1::G00027Context members
DXD81_RS15450DXD81_RS15455
Partner locus tags
DXD81_RS15450DXD81_RS15455
Partner old locus tags
DXD81_15460DXD81_15465
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117639905.1Primary protein accession used for annex mappings.
UniProt accessionA0A411ZRP4Primary UniProt accession resolved in the annex database.
UniProt IDA0A411ZRP4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD81_RS15455Primary locus identifier stored in the genes table.
Old locus tagDXD81_15465Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QSOL01000017.1Sequence record reported by the local genomic context database.
Genomic interval18 887-19 975 nt1 089 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span18 202-19 975 ntGCF_003436075::NZ_QSOL01000017.1::G00027
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003436075::NZ_QSOL01000017.1::G00027Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QSOL01000017.1All displayed genes belong to this local TCS context.
Neighborhood span18 202-19 975 nt1 774 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
18 202 nt19 975 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXD81_RS15450GCF_003436075#DXD81_RS15450
RROmpR
18 202-18 900 nt · Forward (+)
DXD81_RS15455GCF_003436075#DXD81_RS15455
HKClassicCurrent focus
18 887-19 975 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003436075#DXD81_RS15455The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2736922
Simplified PFAM architecture for HKOC_2736922
PFAM domain coverage: 173 / 362 aa (47.8%)
1 aa362 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[140-203] | HATPase_c[253-361]
- Domain count: 2
- Matched identifier: HKOC_2736922
- Positioned domains: HisKA 140-203 ; HATPase_c 253-361
Cluster members and taxonomy
Representative gene: GCF_003436075#DXD81_RS15455
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003436075
AssemblyASM343607v1 · Scaffoldhaploid
Genome composition3 875 562 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 115 · HK 61 · RR 53CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key