1 HisKA#1
129-172 aa · 44 aa · 13.0% of protein
Raw token
HisKA:129:0.0000252:172:50:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS08035
Histidine kinase, Classic
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeClassicLength338 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000154825#ANASTE_RS08035Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length338 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage154 / 338 aa (45.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa338 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.5% of protein
Raw token
HATPase_c:221:5.47e-20:330:110:109- Raw architecture: HisKA:129:0.0000252:172:50:64#HATPase_c:221:5.47e-20:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000154825::NZ_DS560019.1::G00007
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span693110-694788Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_01741RefSeq proteinWP_007050503.1
Context group ID
GCF_000154825::NZ_DS560019.1::G00007Context members
ANASTE_RS08035ANASTE_RS08040
Partner locus tags
ANASTE_RS08035ANASTE_RS08040
Partner old locus tags
ANASTE_01741ANASTE_01742
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007050503.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E3E0R1Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E3E0R1_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS08035Primary locus identifier stored in the genes table.
Old locus tagANASTE_01741Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560019.1Sequence record reported by the local genomic context database.
Genomic interval693 110-694 126 nt1 017 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span693 110-694 788 ntGCF_000154825::NZ_DS560019.1::G00007
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560019.1::G00007Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560019.1All displayed genes belong to this local TCS context.
Neighborhood span693 110-694 788 nt1 679 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
693 110 nt694 788 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ANASTE_RS08035GCF_000154825#ANASTE_RS08035
HKClassicCurrent focus
693 110-694 126 nt · Reverse (-)
ANASTE_RS08040GCF_000154825#ANASTE_RS08040
RROmpR
694 123-694 788 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS08035The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2841979
Simplified PFAM architecture for HKOC_2841979
PFAM domain coverage: 111 / 338 aa (32.8%)
1 aa338 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-331]
- Domain count: 1
- Matched identifier: HKOC_2841979
- Positioned domains: HATPase_c 221-331
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS08035
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key