1 HisKA#1
488-554 aa · 67 aa · 9.4% of protein
Raw token
HisKA:488:1.15e-17:554:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS02975
Histidine kinase, Classic
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeClassicLength711 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000154825#ANASTE_RS02975Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length711 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 711 aa (22.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa711 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
601-693 aa · 93 aa · 13.1% of protein
Raw token
HATPase_c:601:0.0000000000324:693:97:109- Raw architecture: HisKA:488:1.15e-17:554:67:64#HATPase_c:601:0.0000000000324:693:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000154825::NZ_DS560015.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span629534-632389Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_00994RefSeq proteinWP_052294580.1
Context group ID
GCF_000154825::NZ_DS560015.1::G00022Context members
ANASTE_RS02975ANASTE_RS02980
Partner locus tags
ANASTE_RS02975ANASTE_RS02980
Partner old locus tags
ANASTE_00994ANASTE_00995
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_052294580.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS02975Primary locus identifier stored in the genes table.
Old locus tagANASTE_00994Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560015.1Sequence record reported by the local genomic context database.
Genomic interval629 534-631 669 nt2 136 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span629 534-632 389 ntGCF_000154825::NZ_DS560015.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560015.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560015.1All displayed genes belong to this local TCS context.
Neighborhood span629 534-632 389 nt2 856 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
629 534 nt632 389 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ANASTE_RS02975GCF_000154825#ANASTE_RS02975
HKClassicCurrent focus
629 534-631 669 nt · Reverse (-)
ANASTE_RS02980GCF_000154825#ANASTE_RS02980
RROmpR
631 679-632 389 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS02975The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0749011
Simplified PFAM architecture for HKOC_0749011
PFAM domain coverage: 159 / 711 aa (22.4%)
1 aa711 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[488-554] | HATPase_c[601-692]
- Domain count: 2
- Matched identifier: HKOC_0749011
- Positioned domains: HisKA 488-554 ; HATPase_c 601-692
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS02975
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key