1 HisKA#1
306-372 aa · 67 aa · 8.2% of protein
Raw token
HisKA:306:2.15e-16:372:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS07700
Histidine kinase, Hybrid
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeHybridLength818 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_000154825#ANASTE_RS07700Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length818 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage292 / 818 aa (35.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa818 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
420-533 aa · 114 aa · 13.9% of protein
Raw token
HATPase_c:420:3.58e-27:533:114:1093 Response_reg#3
694-804 aa · 111 aa · 13.6% of protein
Raw token
Response_reg:694:5.29e-28:804:111:111- Raw architecture: HisKA:306:2.15e-16:372:67:64#HATPase_c:420:3.58e-27:533:114:109#Response_reg:694:5.29e-28:804:111:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_000154825::NZ_DS560019.1::G00004
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span627848-630304Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_01673RefSeq proteinWP_007050439.1
Context group ID
GCF_000154825::NZ_DS560019.1::G00004Context members
ANASTE_RS07700
Partner locus tags
ANASTE_RS07700
Partner old locus tags
ANASTE_01673
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007050439.1Primary protein accession used for annex mappings.
UniProt accessionB1C8Q9Primary UniProt accession resolved in the annex database.
UniProt IDB1C8Q9_9FIRMDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS07700Primary locus identifier stored in the genes table.
Old locus tagANASTE_01673Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560019.1Sequence record reported by the local genomic context database.
Genomic interval627 848-630 304 nt2 457 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span627 848-630 304 ntGCF_000154825::NZ_DS560019.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560019.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560019.1All displayed genes belong to this local TCS context.
Neighborhood span627 848-630 304 nt2 457 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
627 848 nt630 304 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ANASTE_RS07700GCF_000154825#ANASTE_RS07700
HKHybridCurrent focus
627 848-630 304 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS07700The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0531731
Simplified PFAM architecture for HKOC_0531731
PFAM domain coverage: 298 / 818 aa (36.4%)
1 aa818 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[306-372] | HATPase_c[420-534] | Response_reg[694-809]
- Domain count: 3
- Matched identifier: HKOC_0531731
- Positioned domains: HisKA 306-372 ; HATPase_c 420-534 ; Response_reg 694-809
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS07700
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key