1 HisKA#1
130-179 aa · 50 aa · 14.8% of protein
Raw token
HisKA:130:0.0000401:179:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACGG89_RS13565
Histidine kinase, Classic
Anaerostipes hadrus · GCF_042845895
ClassHKTypeClassicLength337 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_042845895#ACGG89_RS13565Stable P2CS identifier used across views.
GenomeGCF_042845895Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Anaerostipes
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length337 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage159 / 337 aa (47.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa337 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
225-333 aa · 109 aa · 32.3% of protein
Raw token
HATPase_c:225:8.49e-20:333:109:109- Raw architecture: HisKA:130:0.0000401:179:53:64#HATPase_c:225:8.49e-20:333:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_042845895::NZ_BAABYN010000001.1::G00029
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span2782587-2784335Genomic interval covered by the local TCS group.
Identifiers
Old locus tagI2800192A2_26840RefSeq proteinWP_227080750.1
Context group ID
GCF_042845895::NZ_BAABYN010000001.1::G00029Context members
ACGG89_RS13565ACGG89_RS13570
Partner locus tags
ACGG89_RS13565ACGG89_RS13570
Partner old locus tags
I2800192A2_26840I2800192A2_26850
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_227080750.1Primary protein accession used for annex mappings.
UniProt accessionA0ABQ0C188Primary UniProt accession resolved in the annex database.
UniProt IDA0ABQ0C188_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACGG89_RS13565Primary locus identifier stored in the genes table.
Old locus tagI2800192A2_26840Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_BAABYN010000001.1Sequence record reported by the local genomic context database.
Genomic interval2 782 587-2 783 600 nt1 014 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span2 782 587-2 784 335 ntGCF_042845895::NZ_BAABYN010000001.1::G00029
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_042845895::NZ_BAABYN010000001.1::G00029Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_BAABYN010000001.1All displayed genes belong to this local TCS context.
Neighborhood span2 782 587-2 784 335 nt1 749 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
2 782 587 nt2 784 335 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ACGG89_RS13565GCF_042845895#ACGG89_RS13565
HKClassicCurrent focus
2 782 587-2 783 600 nt · Reverse (-)
ACGG89_RS13570GCF_042845895#ACGG89_RS13570
RROmpR
2 783 652-2 784 335 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_020557905#LIZ97_RS03630Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2845413
Simplified PFAM architecture for HKOC_2845413
PFAM domain coverage: 109 / 337 aa (32.3%)
1 aa337 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[225-333]
- Domain count: 1
- Matched identifier: HKOC_2845413
- Positioned domains: HATPase_c 225-333
Cluster members and taxonomy
Representative gene: GCF_020557905#LIZ97_RS03630
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 649 756 · GCF_042845895
AssemblyASM4284589v1 · Contighaploid
Genome composition3 562 690 bp · 37,0% GCAnaerostipes hadrus
Signal transduction countsGenes 66 · HK 32 · RR 33CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusAnaerostipes
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Anaerostipes
Related genes
Preview from the same derived genome key