1 His_kinase#1
56-133 aa · 78 aa · 30.4% of protein
Raw token
His_kinase:56:6.32e-23:133:78:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
P2R17_RS06995
Histidine kinase, Classic
Bacillus sp. Cr_R3 · GCF_029222485
ClassHKTypeClassicLength257 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_029222485#P2R17_RS06995Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length257 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 257 aa (66.9%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa257 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
152-245 aa · 94 aa · 36.6% of protein
Raw token
HATPase_c:152:0.00000224:245:107:109- Raw architecture: His_kinase:56:6.32e-23:133:78:80#HATPase_c:152:0.00000224:245:107:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_029222485::NZ_JARHXH010000020.1::G00018
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span92776-93549Genomic interval covered by the local TCS group.
Identifiers
Old locus tagP2R17_07025RefSeq proteinWP_063224786.1
Context group ID
GCF_029222485::NZ_JARHXH010000020.1::G00018Context members
P2R17_RS06995
Partner locus tags
P2R17_RS06995
Partner old locus tags
P2R17_07025
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_063224786.1Primary protein accession used for annex mappings.
UniProt accessionA0A2B0XFW6Primary UniProt accession resolved in the annex database.
UniProt IDA0A2B0XFW6_BACANDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagP2R17_RS06995Primary locus identifier stored in the genes table.
Old locus tagP2R17_07025Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JARHXH010000020.1Sequence record reported by the local genomic context database.
Genomic interval92 776-93 549 nt774 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span92 776-93 549 ntGCF_029222485::NZ_JARHXH010000020.1::G00018
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_029222485::NZ_JARHXH010000020.1::G00018Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JARHXH010000020.1All displayed genes belong to this local TCS context.
Neighborhood span92 776-93 549 nt774 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
92 776 nt93 549 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
P2R17_RS06995GCF_029222485#P2R17_RS06995
HKClassicCurrent focus
92 776-93 549 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001619425#B4082_RS25255Use this link to inspect the representative gene detail.
PFAM architectureHis_kinase1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2916106
Simplified PFAM architecture for HKOC_2916106
PFAM domain coverage: 77 / 257 aa (30.0%)
1 aa257 aa
His_kinase
- Simplified architecture: His_kinase
- Raw architecture: His_kinase[57-133]
- Domain count: 1
- Matched identifier: HKOC_2916106
- Positioned domains: His_kinase 57-133
Cluster members and taxonomy
Representative gene: GCF_001619425#B4082_RS25255
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 3 031 022 · GCF_029222485
AssemblyASM2922248v1 · Contighaploid
Genome composition5 951 258 bp · 35,0% GCBacillus sp. Cr_R3
Signal transduction countsGenes 127 · HK 69 · RR 58CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key