1 His_kinase#1
56-133 aa · 78 aa · 30.4% of protein
Raw token
His_kinase:56:6.32e-23:133:78:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
B4082_RS25255
Histidine kinase, Classic
Bacillus cereus · GCF_001619425
ClassHKTypeClassicLength257 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001619425#B4082_RS25255Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length257 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 257 aa (66.9%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa257 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
152-245 aa · 94 aa · 36.6% of protein
Raw token
HATPase_c:152:0.00000224:245:107:109- Raw architecture: His_kinase:56:6.32e-23:133:78:80#HATPase_c:152:0.00000224:245:107:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001619425::NZ_LJKA01000073.1::G00066
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span119141-120606Genomic interval covered by the local TCS group.
Identifiers
Old locus tagB4082_5198RefSeq proteinWP_063224786.1
Context group ID
GCF_001619425::NZ_LJKA01000073.1::G00066Context members
B4082_RS25250B4082_RS25255
Partner locus tags
B4082_RS25250B4082_RS25255
Partner old locus tags
B4082_5197B4082_5198
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_063224786.1Primary protein accession used for annex mappings.
UniProt accessionA0A2B0XFW6Primary UniProt accession resolved in the annex database.
UniProt IDA0A2B0XFW6_BACANDisplay identifier provided by UniProt.
GO / PubMed2 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagB4082_RS25255Primary locus identifier stored in the genes table.
Old locus tagB4082_5198Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LJKA01000073.1Sequence record reported by the local genomic context database.
Genomic interval119 833-120 606 nt774 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span119 141-120 606 ntGCF_001619425::NZ_LJKA01000073.1::G00066
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001619425::NZ_LJKA01000073.1::G00066Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LJKA01000073.1All displayed genes belong to this local TCS context.
Neighborhood span119 141-120 606 nt1 466 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
119 141 nt120 606 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
B4082_RS25250GCF_001619425#B4082_RS25250
RRunclassified
119 141-119 836 nt · Reverse (-)
B4082_RS25255GCF_001619425#B4082_RS25255
HKClassicCurrent focus
119 833-120 606 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001619425#B4082_RS25255The current gene is the representative for this cluster.
PFAM architectureHis_kinase1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2916106
Simplified PFAM architecture for HKOC_2916106
PFAM domain coverage: 77 / 257 aa (30.0%)
1 aa257 aa
His_kinase
- Simplified architecture: His_kinase
- Raw architecture: His_kinase[57-133]
- Domain count: 1
- Matched identifier: HKOC_2916106
- Positioned domains: His_kinase 57-133
Cluster members and taxonomy
Representative gene: GCF_001619425#B4082_RS25255
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001619425
AssemblyASM161942v1 · Scaffoldhaploid
Genome composition5 717 535 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 120 · HK 66 · RR 54CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key