1 His_kinase#1
405-484 aa · 80 aa · 13.2% of protein
Raw token
His_kinase:405:6.64e-27:484:80:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
I2C60_RS06255
Histidine kinase, Classic
Blautia wexlerae · GCF_015550855
ClassHKTypeClassicLength608 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_015550855#I2C60_RS06255Stable P2CS identifier used across views.
GenomeGCF_015550855Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length608 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 608 aa (29.3%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa608 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
504-601 aa · 98 aa · 16.1% of protein
Raw token
HATPase_c:504:0.000000000000272:601:107:109- Raw architecture: His_kinase:405:6.64e-27:484:80:80#HATPase_c:504:0.000000000000272:601:107:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_015550855::NZ_JADNBQ010000061.1::G00057
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span6126-9505Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_015550855::NZ_JADNBQ010000061.1::G00057Context members
I2C60_RS06255I2C60_RS06260
Partner locus tags
I2C60_RS06255I2C60_RS06260
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_022379823.1Primary protein accession used for annex mappings.
UniProt accessionA0A174FA91Primary UniProt accession resolved in the annex database.
UniProt IDA0A174FA91_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagI2C60_RS06255Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JADNBQ010000061.1Sequence record reported by the local genomic context database.
Genomic interval6 126-7 952 nt1 827 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span6 126-9 505 ntGCF_015550855::NZ_JADNBQ010000061.1::G00057
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_015550855::NZ_JADNBQ010000061.1::G00057Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JADNBQ010000061.1All displayed genes belong to this local TCS context.
Neighborhood span6 126-9 505 nt3 380 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
6 126 nt9 505 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
I2C60_RS06255GCF_015550855#I2C60_RS06255
HKClassicCurrent focus
6 126-7 952 nt · Reverse (-)
I2C60_RS06260GCF_015550855#I2C60_RS06260
RRunclassified
7 952-9 505 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001404775#ARA22_RS16140Use this link to inspect the representative gene detail.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1013655
Simplified PFAM architecture for HKOC_1013655
PFAM domain coverage: 177 / 608 aa (29.1%)
1 aa608 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[406-484] | HATPase_c[504-601]
- Domain count: 2
- Matched identifier: HKOC_1013655
- Positioned domains: His_kinase 406-484 ; HATPase_c 504-601
Cluster members and taxonomy
Representative gene: GCF_001404775#ARA22_RS16140
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_015550855
AssemblyASM1555085v1 · Scaffoldhaploid
Genome composition3 919 843 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 124 · HK 62 · RR 59CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key