1 HisKA#1
85-150 aa · 66 aa · 21.6% of protein
Raw token
HisKA:85:0.0000000616:150:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
I2C60_RS03890
Histidine kinase, Classic
Blautia wexlerae · GCF_015550855
ClassHKTypeClassicLength305 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_015550855#I2C60_RS03890Stable P2CS identifier used across views.
GenomeGCF_015550855Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length305 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage169 / 305 aa (55.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa305 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
202-304 aa · 103 aa · 33.8% of protein
Raw token
HATPase_c:202:2.19e-30:304:103:109- Raw architecture: HisKA:85:0.0000000616:150:66:64#HATPase_c:202:2.19e-30:304:103:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_015550855::NZ_JADNBQ010000032.1::G00039
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span9900-11515Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_015550855::NZ_JADNBQ010000032.1::G00039Context members
I2C60_RS03885I2C60_RS03890
Partner locus tags
I2C60_RS03885I2C60_RS03890
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_118521801.1Primary protein accession used for annex mappings.
UniProt accessionA0A6L8T7P4Primary UniProt accession resolved in the annex database.
UniProt IDA0A6L8T7P4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 1Unique GO terms and literature references available below.
Reference hubs
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagI2C60_RS03890Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JADNBQ010000032.1Sequence record reported by the local genomic context database.
Genomic interval10 598-11 515 nt918 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span9 900-11 515 ntGCF_015550855::NZ_JADNBQ010000032.1::G00039
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_015550855::NZ_JADNBQ010000032.1::G00039Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JADNBQ010000032.1All displayed genes belong to this local TCS context.
Neighborhood span9 900-11 515 nt1 616 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
9 900 nt11 515 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
I2C60_RS03885GCF_015550855#I2C60_RS03885
RROmpR
9 900-10 592 nt · Forward (+)
I2C60_RS03890GCF_015550855#I2C60_RS03890
HKClassicCurrent focus
10 598-11 515 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_009876865#GT728_RS20695Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2882459
Simplified PFAM architecture for HKOC_2882459
PFAM domain coverage: 170 / 305 aa (55.7%)
1 aa305 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[85-148] | HATPase_c[199-304]
- Domain count: 2
- Matched identifier: HKOC_2882459
- Positioned domains: HisKA 85-148 ; HATPase_c 199-304
Cluster members and taxonomy
Representative gene: GCF_009876865#GT728_RS20695
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_015550855
AssemblyASM1555085v1 · Scaffoldhaploid
Genome composition3 919 843 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 124 · HK 62 · RR 59CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key