1 HisKA#1
202-262 aa · 61 aa · 14.3% of protein
Raw token
HisKA:202:0.000000000112:262:61:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
I2C60_RS02530
Histidine kinase, Classic
Blautia wexlerae · GCF_015550855
ClassHKTypeClassicLength427 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_015550855#I2C60_RS02530Stable P2CS identifier used across views.
GenomeGCF_015550855Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length427 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage173 / 427 aa (40.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa427 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
311-422 aa · 112 aa · 26.2% of protein
Raw token
HATPase_c:311:4.06e-25:422:112:109- Raw architecture: HisKA:202:0.000000000112:262:61:64#HATPase_c:311:4.06e-25:422:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_015550855::NZ_JADNBQ010000018.1::G00021
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span19212-21160Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_015550855::NZ_JADNBQ010000018.1::G00021Context members
I2C60_RS02530I2C60_RS02535
Partner locus tags
I2C60_RS02530I2C60_RS02535
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_008706012.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagI2C60_RS02530Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JADNBQ010000018.1Sequence record reported by the local genomic context database.
Genomic interval19 212-20 495 nt1 284 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span19 212-21 160 ntGCF_015550855::NZ_JADNBQ010000018.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_015550855::NZ_JADNBQ010000018.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JADNBQ010000018.1All displayed genes belong to this local TCS context.
Neighborhood span19 212-21 160 nt1 949 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
19 212 nt21 160 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
I2C60_RS02530GCF_015550855#I2C60_RS02530
HKClassicCurrent focus
19 212-20 495 nt · Reverse (-)
I2C60_RS02535GCF_015550855#I2C60_RS02535
RROmpR
20 501-21 160 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013304535#G5A81_RS15275Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2201823
Simplified PFAM architecture for HKOC_2201823
PFAM domain coverage: 169 / 427 aa (39.6%)
1 aa427 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[204-262] | HATPase_c[312-421]
- Domain count: 2
- Matched identifier: HKOC_2201823
- Positioned domains: HisKA 204-262 ; HATPase_c 312-421
Cluster members and taxonomy
Representative gene: GCF_013304535#G5A81_RS15275
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_015550855
AssemblyASM1555085v1 · Scaffoldhaploid
Genome composition3 919 843 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 124 · HK 62 · RR 59CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key