1 HisKA#1
670-736 aa · 67 aa · 7.5% of protein
Raw token
HisKA:670:0.00000000000000701:736:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
G4476_RS02635
Histidine kinase, Classic
Blautia wexlerae · GCF_013301775
ClassHKTypeClassicLength894 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_013301775#G4476_RS02635Stable P2CS identifier used across views.
GenomeGCF_013301775Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length894 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 894 aa (17.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa894 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
782-874 aa · 93 aa · 10.4% of protein
Raw token
HATPase_c:782:0.00000000018:874:97:109- Raw architecture: HisKA:670:0.00000000000000701:736:67:64#HATPase_c:782:0.00000000018:874:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_013301775::NZ_JAAIOX010000005.1::G00047
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span65715-69179Genomic interval covered by the local TCS group.
Identifiers
Old locus tagG4476_02650RefSeq proteinWP_118521191.1
Context group ID
GCF_013301775::NZ_JAAIOX010000005.1::G00047Context members
G4476_RS02635G4476_RS02640
Partner locus tags
G4476_RS02635G4476_RS02640
Partner old locus tags
G4476_02650G4476_02655
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_118521191.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagG4476_RS02635Primary locus identifier stored in the genes table.
Old locus tagG4476_02650Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAAIOX010000005.1Sequence record reported by the local genomic context database.
Genomic interval65 715-68 399 nt2 685 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span65 715-69 179 ntGCF_013301775::NZ_JAAIOX010000005.1::G00047
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_013301775::NZ_JAAIOX010000005.1::G00047Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAAIOX010000005.1All displayed genes belong to this local TCS context.
Neighborhood span65 715-69 179 nt3 465 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
65 715 nt69 179 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
G4476_RS02635GCF_013301775#G4476_RS02635
HKClassicCurrent focus
65 715-68 399 nt · Reverse (-)
G4476_RS02640GCF_013301775#G4476_RS02640
RROmpR
68 484-69 179 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_013299815#G4455_RS01835Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0421794
Simplified PFAM architecture for HKOC_0421794
PFAM domain coverage: 157 / 894 aa (17.6%)
1 aa894 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[671-735] | HATPase_c[783-874]
- Domain count: 2
- Matched identifier: HKOC_0421794
- Positioned domains: HisKA 671-735 ; HATPase_c 783-874
Cluster members and taxonomy
Representative gene: GCF_013299815#G4455_RS01835
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_013301775
AssemblyASM1330177v1 · Contighaploid
Genome composition4 087 349 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 123 · HK 61 · RR 61CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key