1 HisKA#1
212-274 aa · 63 aa · 14.6% of protein
Raw token
HisKA:212:0.000000000000482:274:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD81_RS14710
Histidine kinase, Classic
Blautia obeum · GCF_003436075
ClassHKTypeClassicLength432 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003436075#DXD81_RS14710Stable P2CS identifier used across views.
GenomeGCF_003436075Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length432 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 432 aa (40.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa432 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
322-432 aa · 111 aa · 25.7% of protein
Raw token
HATPase_c:322:4.54e-26:432:111:109- Raw architecture: HisKA:212:0.000000000000482:274:63:64#HATPase_c:322:4.54e-26:432:111:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003436075::NZ_QSOL01000015.1::G00024
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span26467-28447Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD81_14720RefSeq proteinWP_024739062.1
Context group ID
GCF_003436075::NZ_QSOL01000015.1::G00024Context members
DXD81_RS14710DXD81_RS14715
Partner locus tags
DXD81_RS14710DXD81_RS14715
Partner old locus tags
DXD81_14720DXD81_14725
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_024739062.1Primary protein accession used for annex mappings.
UniProt accessionA0A3E4F7Y5Primary UniProt accession resolved in the annex database.
UniProt IDA0A3E4F7Y5_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD81_RS14710Primary locus identifier stored in the genes table.
Old locus tagDXD81_14720Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QSOL01000015.1Sequence record reported by the local genomic context database.
Genomic interval26 467-27 765 nt1 299 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span26 467-28 447 ntGCF_003436075::NZ_QSOL01000015.1::G00024
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003436075::NZ_QSOL01000015.1::G00024Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QSOL01000015.1All displayed genes belong to this local TCS context.
Neighborhood span26 467-28 447 nt1 981 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
26 467 nt28 447 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXD81_RS14710GCF_003436075#DXD81_RS14710
HKClassicCurrent focus
26 467-27 765 nt · Reverse (-)
DXD81_RS14715GCF_003436075#DXD81_RS14715
RROmpR
27 758-28 447 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003436075#DXD81_RS14710The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2153720
Simplified PFAM architecture for HKOC_2153720
PFAM domain coverage: 174 / 432 aa (40.3%)
1 aa432 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[211-274] | HATPase_c[322-431]
- Domain count: 2
- Matched identifier: HKOC_2153720
- Positioned domains: HisKA 211-274 ; HATPase_c 322-431
Cluster members and taxonomy
Representative gene: GCF_003436075#DXD81_RS14710
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003436075
AssemblyASM343607v1 · Scaffoldhaploid
Genome composition3 875 562 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 115 · HK 61 · RR 53CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key