1 HisKA#1
203-273 aa · 71 aa · 16.6% of protein
Raw token
HisKA:203:0.000000000000247:273:71:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DXD81_RS07655
Histidine kinase, Classic
Blautia obeum · GCF_003436075
ClassHKTypeClassicLength427 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003436075#DXD81_RS07655Stable P2CS identifier used across views.
GenomeGCF_003436075Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length427 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 427 aa (41.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa427 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
319-425 aa · 107 aa · 25.1% of protein
Raw token
HATPase_c:319:3.06e-29:425:108:109- Raw architecture: HisKA:203:0.000000000000247:273:71:64#HATPase_c:319:3.06e-29:425:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003436075::NZ_QSOL01000004.1::G00049
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span179565-181562Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDXD81_07655RefSeq proteinWP_117638836.1
Context group ID
GCF_003436075::NZ_QSOL01000004.1::G00049Context members
DXD81_RS07650DXD81_RS07655
Partner locus tags
DXD81_RS07650DXD81_RS07655
Partner old locus tags
DXD81_07650DXD81_07655
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_117638836.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDXD81_RS07655Primary locus identifier stored in the genes table.
Old locus tagDXD81_07655Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QSOL01000004.1Sequence record reported by the local genomic context database.
Genomic interval180 279-181 562 nt1 284 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span179 565-181 562 ntGCF_003436075::NZ_QSOL01000004.1::G00049
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003436075::NZ_QSOL01000004.1::G00049Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QSOL01000004.1All displayed genes belong to this local TCS context.
Neighborhood span179 565-181 562 nt1 998 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
179 565 nt181 562 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DXD81_RS07650GCF_003436075#DXD81_RS07650
RROmpR
179 565-180 278 nt · Reverse (-)
DXD81_RS07655GCF_003436075#DXD81_RS07655
HKClassicCurrent focus
180 279-181 562 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003436075#DXD81_RS07655The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2200893
Simplified PFAM architecture for HKOC_2200893
PFAM domain coverage: 177 / 427 aa (41.5%)
1 aa427 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[203-273] | HATPase_c[320-425]
- Domain count: 2
- Matched identifier: HKOC_2200893
- Positioned domains: HisKA 203-273 ; HATPase_c 320-425
Cluster members and taxonomy
Representative gene: GCF_003436075#DXD81_RS07655
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003436075
AssemblyASM343607v1 · Scaffoldhaploid
Genome composition3 875 562 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 115 · HK 61 · RR 53CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key