1 HisKA#1
216-280 aa · 65 aa · 14.5% of protein
Raw token
HisKA:216:5.04e-16:280:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS11490
Histidine kinase, Classic
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeClassicLength447 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000154825#ANASTE_RS11490Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length447 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage177 / 447 aa (39.6%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa447 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
329-440 aa · 112 aa · 25.1% of protein
Raw token
HATPase_c:329:1.26e-29:440:112:109- Raw architecture: HisKA:216:5.04e-16:280:65:64#HATPase_c:329:1.26e-29:440:112:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000154825::NZ_DS560019.1::G00006
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span683525-685541Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_01731RefSeq proteinWP_007050493.1
Context group ID
GCF_000154825::NZ_DS560019.1::G00006Context members
ANASTE_RS11490ANASTE_RS07995
Partner locus tags
ANASTE_RS11490ANASTE_RS07995
Partner old locus tags
ANASTE_01731ANASTE_01732
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007050493.1Primary protein accession used for annex mappings.
UniProt accessionB1C8W3Primary UniProt accession resolved in the annex database.
UniProt IDB1C8W3_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS11490Primary locus identifier stored in the genes table.
Old locus tagANASTE_01731Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560019.1Sequence record reported by the local genomic context database.
Genomic interval683 525-684 868 nt1 344 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span683 525-685 541 ntGCF_000154825::NZ_DS560019.1::G00006
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560019.1::G00006Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560019.1All displayed genes belong to this local TCS context.
Neighborhood span683 525-685 541 nt2 017 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
683 525 nt685 541 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ANASTE_RS11490GCF_000154825#ANASTE_RS11490
HKClassicCurrent focus
683 525-684 868 nt · Reverse (-)
ANASTE_RS07995GCF_000154825#ANASTE_RS07995
RROmpR
684 861-685 541 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS11490The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1999536
Simplified PFAM architecture for HKOC_1999536
PFAM domain coverage: 177 / 447 aa (39.6%)
1 aa447 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[216-280] | HATPase_c[329-440]
- Domain count: 2
- Matched identifier: HKOC_1999536
- Positioned domains: HisKA 216-280 ; HATPase_c 329-440
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS11490
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key