1 HisKA#1
218-283 aa · 66 aa · 11.2% of protein
Raw token
HisKA:218:4.78e-18:283:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS11240
Histidine kinase, Hybrid
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeHybridLength591 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000154825#ANASTE_RS11240Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length591 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage298 / 591 aa (50.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa591 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
332-446 aa · 115 aa · 19.5% of protein
Raw token
HATPase_c:332:2.98e-32:446:115:1093 Response_reg#3
469-585 aa · 117 aa · 19.8% of protein
Raw token
Response_reg:469:3.47e-26:585:117:111- Raw architecture: HisKA:218:4.78e-18:283:66:64#HATPase_c:332:2.98e-32:446:115:109#Response_reg:469:3.47e-26:585:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000154825::NZ_DS560015.1::G00021
Group size22 locus tags listed below.
HK / RR2 / 0Counts resolved for the local TCS neighborhood.
Context span616139-620886Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_00981RefSeq proteinWP_007049425.1
Context group ID
GCF_000154825::NZ_DS560015.1::G00021Context members
ANASTE_RS02925ANASTE_RS11240
Partner locus tags
ANASTE_RS02925ANASTE_RS11240
Partner old locus tags
ANASTE_00980ANASTE_00981
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007049425.1Primary protein accession used for annex mappings.
UniProt accessionB1C8C4Primary UniProt accession resolved in the annex database.
UniProt IDB1C8C4_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS11240Primary locus identifier stored in the genes table.
Old locus tagANASTE_00981Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560015.1Sequence record reported by the local genomic context database.
Genomic interval619 111-620 886 nt1 776 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span616 139-620 886 ntGCF_000154825::NZ_DS560015.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560015.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560015.1All displayed genes belong to this local TCS context.
Neighborhood span616 139-620 886 nt4 748 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
616 139 nt620 886 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ANASTE_RS02925GCF_000154825#ANASTE_RS02925
HKHybrid
616 139-618 925 nt · Reverse (-)
ANASTE_RS11240GCF_000154825#ANASTE_RS11240
HKHybridCurrent focus
619 111-620 886 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS11240The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1105119
Simplified PFAM architecture for HKOC_1105119
PFAM domain coverage: 296 / 591 aa (50.1%)
1 aa591 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[218-283] | HATPase_c[332-444] | Response_reg[469-585]
- Domain count: 3
- Matched identifier: HKOC_1105119
- Positioned domains: HisKA 218-283 ; HATPase_c 332-444 ; Response_reg 469-585
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS11240
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key