1 HisKA#1
363-429 aa · 67 aa · 7.7% of protein
Raw token
HisKA:363:2.57e-17:429:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS11225
Histidine kinase, Hybrid
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeHybridLength872 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000154825#ANASTE_RS11225Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length872 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 872 aa (34.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa872 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
476-593 aa · 118 aa · 13.5% of protein
Raw token
HATPase_c:476:4.83e-28:593:118:1093 Response_reg#3
746-863 aa · 118 aa · 13.5% of protein
Raw token
Response_reg:746:5.77e-28:863:118:111- Raw architecture: HisKA:363:2.57e-17:429:67:64#HATPase_c:476:4.83e-28:593:118:109#Response_reg:746:5.77e-28:863:118:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000154825::NZ_DS560015.1::G00020
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span562833-566983Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_00938RefSeq proteinWP_007049382.1
Context group ID
GCF_000154825::NZ_DS560015.1::G00020Context members
ANASTE_RS11225ANASTE_RS02750
Partner locus tags
ANASTE_RS11225ANASTE_RS02750
Partner old locus tags
ANASTE_00938ANASTE_00939
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_007049382.1Primary protein accession used for annex mappings.
UniProt accessionB1C881Primary UniProt accession resolved in the annex database.
UniProt IDB1C881_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS11225Primary locus identifier stored in the genes table.
Old locus tagANASTE_00938Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560015.1Sequence record reported by the local genomic context database.
Genomic interval562 833-565 451 nt2 619 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span562 833-566 983 ntGCF_000154825::NZ_DS560015.1::G00020
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560015.1::G00020Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560015.1All displayed genes belong to this local TCS context.
Neighborhood span562 833-566 983 nt4 151 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
562 833 nt566 983 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ANASTE_RS11225GCF_000154825#ANASTE_RS11225
HKHybridCurrent focus
562 833-565 451 nt · Reverse (-)
ANASTE_RS02750GCF_000154825#ANASTE_RS02750
RRFrzZ
565 625-566 983 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS11225The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0456424
Simplified PFAM architecture for HKOC_0456424
PFAM domain coverage: 300 / 872 aa (34.4%)
1 aa872 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[363-429] | HATPase_c[477-592] | Response_reg[746-862]
- Domain count: 3
- Matched identifier: HKOC_0456424
- Positioned domains: HisKA 363-429 ; HATPase_c 477-592 ; Response_reg 746-862
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS11225
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key