1 PTS_EIIC#1
4-242 aa · 239 aa · 32.2% of protein
Raw token
PTS_EIIC:4:1.44e-22:242:241:315P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ANASTE_RS11145
Histidine kinase, Classic
Anaerofustis stercorihominis DSM 17244 · GCF_000154825
ClassHKTypeClassicLength743 aaTM0ValidatedNoCompleteYesContexttriad
Gene IDGCF_000154825#ANASTE_RS11145Stable P2CS identifier used across views.
GenomeGCF_000154825Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Anaerofustis
Domain signature
Compact overview inferred from the domain field
PTS_EIICHisKAHATPase_c
Protein length743 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage424 / 743 aa (57.1%)Merged over positioned domains only.
Domain description1 PTS_EIIC,1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa743 aa
Domain-by-domain annotation3 items
2 HisKA#2
482-548 aa · 67 aa · 9.0% of protein
Raw token
HisKA:482:2.55e-18:548:67:643 HATPase_c#3
594-711 aa · 118 aa · 15.9% of protein
Raw token
HATPase_c:594:3.55e-26:711:118:109- Raw architecture: PTS_EIIC:4:1.44e-22:242:241:315#HisKA:482:2.55e-18:548:67:64#HATPase_c:594:3.55e-26:711:118:109
- Domain description: 1 PTS_EIIC,1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labeltriadGCF_000154825::NZ_DS560015.1::G00017
Group size33 locus tags listed below.
HK / RR2 / 1Counts resolved for the local TCS neighborhood.
Context span137154-142977Genomic interval covered by the local TCS group.
Identifiers
Old locus tagANASTE_00458RefSeq proteinWP_341271221.1
Context group ID
GCF_000154825::NZ_DS560015.1::G00017Context members
ANASTE_RS00595ANASTE_RS11145ANASTE_RS11150
Partner locus tags
ANASTE_RS00595ANASTE_RS11145ANASTE_RS11150
Partner old locus tags
ANASTE_00456ANASTE_00458ANASTE_00459
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_341271221.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagANASTE_RS11145Primary locus identifier stored in the genes table.
Old locus tagANASTE_00458Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_DS560015.1Sequence record reported by the local genomic context database.
Genomic interval140 397-142 628 nt2 232 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span137 154-142 977 ntGCF_000154825::NZ_DS560015.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000154825::NZ_DS560015.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labeltriadNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_DS560015.1All displayed genes belong to this local TCS context.
Neighborhood span137 154-142 977 nt5 824 nt
Members31 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
137 154 nt142 977 nt
Neighborhood gene cards
3 genes in the current local neighborhood.
ANASTE_RS00595GCF_000154825#ANASTE_RS00595
HKHybrid
137 154-139 901 nt · Forward (+)
ANASTE_RS11145GCF_000154825#ANASTE_RS11145
HKClassicCurrent focus
140 397-142 628 nt · Forward (+)
ANASTE_RS11150GCF_000154825#ANASTE_RS11150
RRCheY
142 588-142 977 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000154825#ANASTE_RS11145The current gene is the representative for this cluster.
PFAM architecturePTS_EIIC + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0684725
Simplified PFAM architecture for HKOC_0684725
PFAM domain coverage: 421 / 743 aa (56.7%)
1 aa743 aa
PTS_EIICHisKAHATPase_c
- Simplified architecture: PTS_EIIC + HisKA + HATPase_c
- Raw architecture: PTS_EIIC[7-242] | HisKA[482-548] | HATPase_c[594-711]
- Domain count: 3
- Matched identifier: HKOC_0684725
- Positioned domains: PTS_EIIC 7-242 ; HisKA 482-548 ; HATPase_c 594-711
Cluster members and taxonomy
Representative gene: GCF_000154825#ANASTE_RS11145
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 445 971 · GCF_000154825
AssemblyASM15482v1 · Scaffoldreference genome · haploid
Genome composition2 284 703 bp · 33,5% GCAnaerofustis stercorihominis DSM 17244
Signal transduction countsGenes 38 · HK 22 · RR 14CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyEubacteriaceaeGenusAnaerofustis
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Eubacteriaceae7Anaerofustis
Related genes
Preview from the same derived genome key