1 HATPase_c#1
996-1065 aa · 70 aa · 4.9% of protein
Raw token
HATPase_c:996:0.000000000000352:1065:70:109P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
COPEUT_RS01290
Probable incomplete histidine kinase
Coprococcus eutactus ATCC 27759 · GCF_000154425
ClassHKTypeUnorthodoxLength1438 aaTM0ValidatedNoCompleteNoContextNo local context
Gene IDGCF_000154425#COPEUT_RS01290Stable P2CS identifier used across views.
GenomeGCF_000154425Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Coprococcus
Selected clusterNo clusterThis gene is not linked to a local CD-HIT cluster.
External referencesMIST4 COPEUT_RS01290MIST4
Domain signature
Compact overview inferred from the domain field
HATPase_cResponse_regHpt
Protein length1438 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage263 / 1438 aa (18.3%)Merged over positioned domains only.
Domain description1 HATPase_c,1 Response_reg,1 HptSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa1438 aa
Domain-by-domain annotation3 items
2 Response_reg#2
1100-1214 aa · 115 aa · 8.0% of protein
Raw token
Response_reg:1100:1.22e-25:1214:115:1113 Hpt#3
1268-1345 aa · 78 aa · 5.4% of protein
Raw token
Hpt:1268:0.000000561:1345:79:84- Raw architecture: HATPase_c:996:0.000000000000352:1065:70:109#Response_reg:1100:1.22e-25:1214:115:111#Hpt:1268:0.000000561:1345:79:84
- Domain description: 1 HATPase_c,1 Response_reg,1 Hpt
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: No
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
No local TCS context mapping is available for this gene.
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No external UniProt / GO / PubMed mapping is available for this gene.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCOPEUT_RS01290Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconUnavailableNo contig or replicon mapping is available for this gene.
Genomic intervalUnavailableNo start/end genomic coordinates are available for this gene.
StrandUnavailableStrand sign follows the local context database convention.
Local TCS group spanUnavailableNo grouped neighborhood span is available for this gene.
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
No local TCS neighborhood is available for this gene on this server.
Clusters
CD-HIT memberships and selected cluster details for the current gene class
No cluster membership available for this gene.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 411 474 · GCF_000154425
AssemblyASM15442v1 · Scaffoldhaploid
Genome composition3 102 987 bp · 43,0% GCCoprococcus eutactus ATCC 27759
Signal transduction countsGenes 82 · HK 42 · RR 38CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusCoprococcus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Coprococcus
Related genes
Preview from the same derived genome key