1 HisKA#1
448-514 aa · 67 aa · 8.1% of protein
Raw token
HisKA:448:2.78e-16:514:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QZL78_RS09805
Histidine kinase, Hybrid
uncultured Blautia sp. · GCF_900066335
ClassHKTypeHybridLength827 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_900066335#QZL78_RS09805Stable P2CS identifier used across views.
GenomeGCF_900066335Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length827 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage301 / 827 aa (36.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa827 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
562-678 aa · 117 aa · 14.1% of protein
Raw token
HATPase_c:562:6.85e-28:678:118:1093 Response_reg#3
707-823 aa · 117 aa · 14.1% of protein
Raw token
Response_reg:707:3.65e-28:823:117:111- Raw architecture: HisKA:448:2.78e-16:514:67:64#HATPase_c:562:6.85e-28:678:118:109#Response_reg:707:3.65e-28:823:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_900066335::NZ_FMEU01000009.1::G00005
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span142945-145428Genomic interval covered by the local TCS group.
Identifiers
Old locus tagSAMEA3545288_01955RefSeq proteinWP_294419291.1
Context group ID
GCF_900066335::NZ_FMEU01000009.1::G00005Context members
QZL78_RS09805
Partner locus tags
QZL78_RS09805
Partner old locus tags
SAMEA3545288_01955
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_294419291.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQZL78_RS09805Primary locus identifier stored in the genes table.
Old locus tagSAMEA3545288_01955Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_FMEU01000009.1Sequence record reported by the local genomic context database.
Genomic interval142 945-145 428 nt2 484 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span142 945-145 428 ntGCF_900066335::NZ_FMEU01000009.1::G00005
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_900066335::NZ_FMEU01000009.1::G00005Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_FMEU01000009.1All displayed genes belong to this local TCS context.
Neighborhood span142 945-145 428 nt2 484 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
142 945 nt145 428 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
QZL78_RS09805GCF_900066335#QZL78_RS09805
HKHybridCurrent focus
142 945-145 428 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_900066335#QZL78_RS09805The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0523242
Simplified PFAM architecture for HKOC_0523242
PFAM domain coverage: 299 / 827 aa (36.2%)
1 aa827 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[448-514] | HATPase_c[562-677] | Response_reg[707-822]
- Domain count: 3
- Matched identifier: HKOC_0523242
- Positioned domains: HisKA 448-514 ; HATPase_c 562-677 ; Response_reg 707-822
Cluster members and taxonomy
Representative gene: GCF_900066335#QZL78_RS09805
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 765 821 · GCF_900066335
Assembly13414_6#64 · Scaffoldhaploid
Genome composition3 557 791 bp · 44,0% GCuncultured Blautia sp.
Signal transduction countsGenes 78 · HK 38 · RR 38CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key