1 HisKA#1
83-145 aa · 63 aa · 20.9% of protein
Raw token
HisKA:83:0.000000000438:145:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QZL78_RS02680
Histidine kinase, Classic
uncultured Blautia sp. · GCF_900066335
ClassHKTypeClassicLength301 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_900066335#QZL78_RS02680Stable P2CS identifier used across views.
GenomeGCF_900066335Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length301 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage163 / 301 aa (54.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa301 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
197-296 aa · 100 aa · 33.2% of protein
Raw token
HATPase_c:197:2.71e-24:296:100:109- Raw architecture: HisKA:83:0.000000000438:145:63:64#HATPase_c:197:2.71e-24:296:100:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_900066335::NZ_FMEU01000002.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span138399-139983Genomic interval covered by the local TCS group.
Identifiers
Old locus tagSAMEA3545288_00517RefSeq proteinWP_055066700.1
Context group ID
GCF_900066335::NZ_FMEU01000002.1::G00022Context members
QZL78_RS02675QZL78_RS02680
Partner locus tags
QZL78_RS02675QZL78_RS02680
Partner old locus tags
SAMEA3545288_00516SAMEA3545288_00517
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055066700.1Primary protein accession used for annex mappings.
UniProt accessionA0A174I9I0Primary UniProt accession resolved in the annex database.
UniProt IDA0A174I9I0_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQZL78_RS02680Primary locus identifier stored in the genes table.
Old locus tagSAMEA3545288_00517Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_FMEU01000002.1Sequence record reported by the local genomic context database.
Genomic interval139 078-139 983 nt906 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span138 399-139 983 ntGCF_900066335::NZ_FMEU01000002.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_900066335::NZ_FMEU01000002.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_FMEU01000002.1All displayed genes belong to this local TCS context.
Neighborhood span138 399-139 983 nt1 585 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
138 399 nt139 983 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
QZL78_RS02675GCF_900066335#QZL78_RS02675
RROmpR
138 399-139 073 nt · Forward (+)
QZL78_RS02680GCF_900066335#QZL78_RS02680
HKClassicCurrent focus
139 078-139 983 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_016586395#JMF83_RS05160Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2865574
Simplified PFAM architecture for HKOC_2865574
PFAM domain coverage: 166 / 324 aa (51.2%)
1 aa324 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[105-167] | HATPase_c[218-320]
- Domain count: 2
- Matched identifier: HKOC_2865574
- Positioned domains: HisKA 105-167 ; HATPase_c 218-320
Cluster members and taxonomy
Representative gene: GCF_016586395#JMF83_RS05160
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 765 821 · GCF_900066335
Assembly13414_6#64 · Scaffoldhaploid
Genome composition3 557 791 bp · 44,0% GCuncultured Blautia sp.
Signal transduction countsGenes 78 · HK 38 · RR 38CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key