1 Response_reg#1
129-209 aa · 81 aa · 37.2% of protein
Raw token
Response_reg:129:7.18e-17:209:81:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
QZL78_RS01980
Response regulator, unclassified
uncultured Blautia sp. · GCF_900066335
ClassRRTypeunclassifiedLength218 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_900066335#QZL78_RS01980Stable P2CS identifier used across views.
GenomeGCF_900066335Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length218 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage81 / 218 aa (37.2%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa218 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:129:7.18e-17:209:81:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_900066335::NZ_FMEU01000001.1::G00032
Group size11 locus tag listed below.
HK / RR0 / 1Counts resolved for the local TCS neighborhood.
Context span417714-418370Genomic interval covered by the local TCS group.
Identifiers
Old locus tagSAMEA3545288_00383RefSeq proteinWP_294417519.1
Context group ID
GCF_900066335::NZ_FMEU01000001.1::G00032Context members
QZL78_RS01980
Partner locus tags
QZL78_RS01980
Partner old locus tags
SAMEA3545288_00383
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_294417519.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQZL78_RS01980Primary locus identifier stored in the genes table.
Old locus tagSAMEA3545288_00383Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_FMEU01000001.1Sequence record reported by the local genomic context database.
Genomic interval417 714-418 370 nt657 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span417 714-418 370 ntGCF_900066335::NZ_FMEU01000001.1::G00032
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_900066335::NZ_FMEU01000001.1::G00032Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_FMEU01000001.1All displayed genes belong to this local TCS context.
Neighborhood span417 714-418 370 nt657 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
417 714 nt418 370 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
QZL78_RS01980GCF_900066335#QZL78_RS01980
RRunclassifiedCurrent focus
417 714-418 370 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_900066335#QZL78_RS01980The current gene is the representative for this cluster.
PFAM architectureHATPase_c + Response_reg2 domains in the representative PFAM annotation.
PFAM architecture for RROC_1845679
Simplified PFAM architecture for RROC_1845679
PFAM domain coverage: 186 / 218 aa (85.3%)
1 aa218 aa
HATPase_cResponse_reg
- Simplified architecture: HATPase_c + Response_reg
- Raw architecture: HATPase_c[2-106] | Response_reg[129-209]
- Domain count: 2
- Matched identifier: RROC_1845679
- Positioned domains: HATPase_c 2-106 ; Response_reg 129-209
Cluster members and taxonomy
Representative gene: GCF_900066335#QZL78_RS01980
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 765 821 · GCF_900066335
Assembly13414_6#64 · Scaffoldhaploid
Genome composition3 557 791 bp · 44,0% GCuncultured Blautia sp.
Signal transduction countsGenes 78 · HK 38 · RR 38CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key