1 HisKA#1
85-149 aa · 65 aa · 21.4% of protein
Raw token
HisKA:85:0.0000000903:149:65:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
I4V76_RS03030
Histidine kinase, Classic
Blautia wexlerae · GCF_015667495
ClassHKTypeClassicLength304 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_015667495#I4V76_RS03030Stable P2CS identifier used across views.
GenomeGCF_015667495Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length304 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage167 / 304 aa (54.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa304 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
202-303 aa · 102 aa · 33.6% of protein
Raw token
HATPase_c:202:6.22e-31:303:102:109- Raw architecture: HisKA:85:0.0000000903:149:65:64#HATPase_c:202:6.22e-31:303:102:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_015667495::NZ_JADPEC010000004.1::G00056
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span78676-80284Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_015667495::NZ_JADPEC010000004.1::G00056Context members
I4V76_RS03030I4V76_RS03035
Partner locus tags
I4V76_RS03030I4V76_RS03035
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_412589909.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagI4V76_RS03030Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JADPEC010000004.1Sequence record reported by the local genomic context database.
Genomic interval78 676-79 581 nt906 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span78 676-80 284 ntGCF_015667495::NZ_JADPEC010000004.1::G00056
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_015667495::NZ_JADPEC010000004.1::G00056Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JADPEC010000004.1All displayed genes belong to this local TCS context.
Neighborhood span78 676-80 284 nt1 609 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
78 676 nt80 284 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
I4V76_RS03030GCF_015667495#I4V76_RS03030
HKClassicCurrent focus
78 676-79 581 nt · Reverse (-)
I4V76_RS03035GCF_015667495#I4V76_RS03035
RROmpR
79 595-80 284 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001405415#ARA37_RS12135Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2883255
Simplified PFAM architecture for HKOC_2883255
PFAM domain coverage: 168 / 304 aa (55.3%)
1 aa304 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[85-147] | HATPase_c[199-303]
- Domain count: 2
- Matched identifier: HKOC_2883255
- Positioned domains: HisKA 85-147 ; HATPase_c 199-303
Cluster members and taxonomy
Representative gene: GCF_001405415#ARA37_RS12135
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_015667495
AssemblyASM1566749v1 · Scaffoldhaploid
Genome composition4 143 050 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 129 · HK 64 · RR 64CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key