1 HisKA#1
208-271 aa · 64 aa · 15.3% of protein
Raw token
HisKA:208:0.00000000000804:271:64:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DN394_RS16550
Histidine kinase, Classic
Bacillus sp. BB081 · GCF_008368895
ClassHKTypeClassicLength418 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_008368895#DN394_RS16550Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length418 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage168 / 418 aa (40.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa418 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
314-417 aa · 104 aa · 24.9% of protein
Raw token
HATPase_c:314:8.26e-23:417:107:109- Raw architecture: HisKA:208:0.00000000000804:271:64:64#HATPase_c:314:8.26e-23:417:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_008368895::NZ_QOZX01000036.1::G00035
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span14934-16190Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDN394_16575RefSeq proteinWP_098209181.1
Context group ID
GCF_008368895::NZ_QOZX01000036.1::G00035Context members
DN394_RS16550
Partner locus tags
DN394_RS16550
Partner old locus tags
DN394_16575
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_098209181.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDN394_RS16550Primary locus identifier stored in the genes table.
Old locus tagDN394_16575Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QOZX01000036.1Sequence record reported by the local genomic context database.
Genomic interval14 934-16 190 nt1 257 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span14 934-16 190 ntGCF_008368895::NZ_QOZX01000036.1::G00035
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_008368895::NZ_QOZX01000036.1::G00035Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QOZX01000036.1All displayed genes belong to this local TCS context.
Neighborhood span14 934-16 190 nt1 257 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
14 934 nt16 190 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
DN394_RS16550GCF_008368895#DN394_RS16550
HKClassicCurrent focus
14 934-16 190 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002557475#CN573_RS23185Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2286323
Simplified PFAM architecture for HKOC_2286323
PFAM domain coverage: 166 / 418 aa (39.7%)
1 aa418 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[208-270] | HATPase_c[315-417]
- Domain count: 2
- Matched identifier: HKOC_2286323
- Positioned domains: HisKA 208-270 ; HATPase_c 315-417
Cluster members and taxonomy
Representative gene: GCF_002557475#CN573_RS23185
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 217 820 · GCF_008368895
AssemblyASM836889v1 · Scaffoldhaploid
Genome composition5 442 865 bp · 35,0% GCBacillus sp. BB081
Signal transduction countsGenes 122 · HK 64 · RR 57CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key