1 HisKA#1
85-152 aa · 68 aa · 21.9% of protein
Raw token
HisKA:85:0.00000000000000742:152:68:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DN394_RS00405
Histidine kinase, Classic
Bacillus sp. BB081 · GCF_008368895
ClassHKTypeClassicLength311 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_008368895#DN394_RS00405Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length311 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 311 aa (57.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa311 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
198-307 aa · 110 aa · 35.4% of protein
Raw token
HATPase_c:198:1.01e-26:307:110:109- Raw architecture: HisKA:85:0.00000000000000742:152:68:64#HATPase_c:198:1.01e-26:307:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_008368895::NZ_QOZX01000002.1::G00021
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span59721-61350Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDN394_00405RefSeq proteinWP_000247661.1
Context group ID
GCF_008368895::NZ_QOZX01000002.1::G00021Context members
DN394_RS00400DN394_RS00405
Partner locus tags
DN394_RS00400DN394_RS00405
Partner old locus tags
DN394_00400DN394_00405
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000247661.1Primary protein accession used for annex mappings.
UniProt accessionA0ABD6TG86Primary UniProt accession resolved in the annex database.
UniProt IDA0ABD6TG86_9BACIDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDN394_RS00405Primary locus identifier stored in the genes table.
Old locus tagDN394_00405Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QOZX01000002.1Sequence record reported by the local genomic context database.
Genomic interval60 415-61 350 nt936 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span59 721-61 350 ntGCF_008368895::NZ_QOZX01000002.1::G00021
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_008368895::NZ_QOZX01000002.1::G00021Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QOZX01000002.1All displayed genes belong to this local TCS context.
Neighborhood span59 721-61 350 nt1 630 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
59 721 nt61 350 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DN394_RS00400GCF_008368895#DN394_RS00400
RROmpR
59 721-60 413 nt · Forward (+)
DN394_RS00405GCF_008368895#DN394_RS00405
HKClassicCurrent focus
60 415-61 350 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000160955#BCERE0006_RS22355Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2876396
Simplified PFAM architecture for HKOC_2876396
PFAM domain coverage: 175 / 311 aa (56.3%)
1 aa311 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[86-152] | HATPase_c[201-308]
- Domain count: 2
- Matched identifier: HKOC_2876396
- Positioned domains: HisKA 86-152 ; HATPase_c 201-308
Cluster members and taxonomy
Representative gene: GCF_000160955#BCERE0006_RS22355
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 217 820 · GCF_008368895
AssemblyASM836889v1 · Scaffoldhaploid
Genome composition5 442 865 bp · 35,0% GCBacillus sp. BB081
Signal transduction countsGenes 122 · HK 64 · RR 57CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key