1 HisKA#1
172-242 aa · 71 aa · 17.9% of protein
Raw token
HisKA:172:0.000000000000904:242:71:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DW740_RS06995
Histidine kinase, Classic
Blautia obeum · GCF_003469845
ClassHKTypeClassicLength396 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003469845#DW740_RS06995Stable P2CS identifier used across views.
GenomeGCF_003469845Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length396 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 396 aa (44.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa396 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
288-394 aa · 107 aa · 27.0% of protein
Raw token
HATPase_c:288:8.06e-30:394:108:109- Raw architecture: HisKA:172:0.000000000000904:242:71:64#HATPase_c:288:8.06e-30:394:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003469845::NZ_QSKF01000004.1::G00039
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span266672-268576Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDW740_07020RefSeq proteinWP_243023288.1
Context group ID
GCF_003469845::NZ_QSKF01000004.1::G00039Context members
DW740_RS06990DW740_RS06995
Partner locus tags
DW740_RS06990DW740_RS06995
Partner old locus tags
DW740_07015DW740_07020
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_243023288.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDW740_RS06995Primary locus identifier stored in the genes table.
Old locus tagDW740_07020Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QSKF01000004.1Sequence record reported by the local genomic context database.
Genomic interval267 386-268 576 nt1 191 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span266 672-268 576 ntGCF_003469845::NZ_QSKF01000004.1::G00039
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003469845::NZ_QSKF01000004.1::G00039Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QSKF01000004.1All displayed genes belong to this local TCS context.
Neighborhood span266 672-268 576 nt1 905 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
266 672 nt268 576 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DW740_RS06990GCF_003469845#DW740_RS06990
RROmpR
266 672-267 385 nt · Reverse (-)
DW740_RS06995GCF_003469845#DW740_RS06995
HKClassicCurrent focus
267 386-268 576 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000210015#CK5_RS03680Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2479006
Simplified PFAM architecture for HKOC_2479006
PFAM domain coverage: 177 / 396 aa (44.7%)
1 aa396 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[172-242] | HATPase_c[289-394]
- Domain count: 2
- Matched identifier: HKOC_2479006
- Positioned domains: HisKA 172-242 ; HATPase_c 289-394
Cluster members and taxonomy
Representative gene: GCF_000210015#CK5_RS03680
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003469845
AssemblyASM346984v1 · Scaffoldhaploid
Genome composition3 617 583 bp · 42,5% GCBlautia obeum
Signal transduction countsGenes 87 · HK 44 · RR 42CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key