1 HisKA_3#1
172-236 aa · 65 aa · 18.0% of protein
Raw token
HisKA_3:172:0.0000000000000632:236:67:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWZ12_RS11705
Histidine kinase, Classic
Blautia obeum · GCF_003457595
ClassHKTypeClassicLength362 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003457595#DWZ12_RS11705Stable P2CS identifier used across views.
GenomeGCF_003457595Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length362 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage149 / 362 aa (41.2%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa362 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
276-359 aa · 84 aa · 23.2% of protein
Raw token
HATPase_c:276:0.0000000000347:359:101:109- Raw architecture: HisKA_3:172:0.0000000000000632:236:67:68#HATPase_c:276:0.0000000000347:359:101:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003457595::NZ_QRSS01000014.1::G00011
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span765-2499Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWZ12_11700RefSeq proteinWP_118044809.1
Context group ID
GCF_003457595::NZ_QRSS01000014.1::G00011Context members
DWZ12_RS11700DWZ12_RS11705
Partner locus tags
DWZ12_RS11700DWZ12_RS11705
Partner old locus tags
DWZ12_11695DWZ12_11700
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_118044809.1Primary protein accession used for annex mappings.
UniProt accessionA0A411ZLQ8Primary UniProt accession resolved in the annex database.
UniProt IDA0A411ZLQ8_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWZ12_RS11705Primary locus identifier stored in the genes table.
Old locus tagDWZ12_11700Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QRSS01000014.1Sequence record reported by the local genomic context database.
Genomic interval1 411-2 499 nt1 089 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span765-2 499 ntGCF_003457595::NZ_QRSS01000014.1::G00011
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003457595::NZ_QRSS01000014.1::G00011Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QRSS01000014.1All displayed genes belong to this local TCS context.
Neighborhood span765-2 499 nt1 735 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
765 nt2 499 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DWZ12_RS11700GCF_003457595#DWZ12_RS11700
RRNarL
765-1 385 nt · Reverse (-)
DWZ12_RS11705GCF_003457595#DWZ12_RS11705
HKClassicCurrent focus
1 411-2 499 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003457595#DWZ12_RS11705The current gene is the representative for this cluster.
PFAM architectureHisKA_3 + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2736928
Simplified PFAM architecture for HKOC_2736928
PFAM domain coverage: 148 / 362 aa (40.9%)
1 aa362 aa
HisKA_3HATPase_c
- Simplified architecture: HisKA_3 + HATPase_c
- Raw architecture: HisKA_3[172-235] | HATPase_c[275-358]
- Domain count: 2
- Matched identifier: HKOC_2736928
- Positioned domains: HisKA_3 172-235 ; HATPase_c 275-358
Cluster members and taxonomy
Representative gene: GCF_003457595#DWZ12_RS11705
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003457595
AssemblyASM345759v1 · Scaffoldhaploid
Genome composition3 533 904 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 89 · HK 49 · RR 39CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key