1 HisKA#1
203-273 aa · 71 aa · 16.6% of protein
Raw token
HisKA:203:0.000000000000335:273:71:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
DWZ12_RS02815
Histidine kinase, Classic
Blautia obeum · GCF_003457595
ClassHKTypeClassicLength427 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_003457595#DWZ12_RS02815Stable P2CS identifier used across views.
GenomeGCF_003457595Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length427 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage179 / 427 aa (41.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa427 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
319-426 aa · 108 aa · 25.3% of protein
Raw token
HATPase_c:319:2.05e-30:426:109:109- Raw architecture: HisKA:203:0.000000000000335:273:71:64#HATPase_c:319:2.05e-30:426:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_003457595::NZ_QRSS01000002.1::G00022
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span239939-241940Genomic interval covered by the local TCS group.
Identifiers
Old locus tagDWZ12_02820RefSeq proteinWP_117628483.1
Context group ID
GCF_003457595::NZ_QRSS01000002.1::G00022Context members
DWZ12_RS02815DWZ12_RS02820
Partner locus tags
DWZ12_RS02815DWZ12_RS02820
Partner old locus tags
DWZ12_02820DWZ12_02825
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_117628483.1Primary protein accession used for annex mappings.
UniProt accessionA0A395X7I7Primary UniProt accession resolved in the annex database.
UniProt IDA0A395X7I7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagDWZ12_RS02815Primary locus identifier stored in the genes table.
Old locus tagDWZ12_02820Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_QRSS01000002.1Sequence record reported by the local genomic context database.
Genomic interval239 939-241 222 nt1 284 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span239 939-241 940 ntGCF_003457595::NZ_QRSS01000002.1::G00022
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_003457595::NZ_QRSS01000002.1::G00022Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_QRSS01000002.1All displayed genes belong to this local TCS context.
Neighborhood span239 939-241 940 nt2 002 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
239 939 nt241 940 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
DWZ12_RS02815GCF_003457595#DWZ12_RS02815
HKClassicCurrent focus
239 939-241 222 nt · Forward (+)
DWZ12_RS02820GCF_003457595#DWZ12_RS02820
RROmpR
241 227-241 940 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_003437665#DXC87_RS12830Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2200897
Simplified PFAM architecture for HKOC_2200897
PFAM domain coverage: 177 / 427 aa (41.5%)
1 aa427 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[203-273] | HATPase_c[320-425]
- Domain count: 2
- Matched identifier: HKOC_2200897
- Positioned domains: HisKA 203-273 ; HATPase_c 320-425
Cluster members and taxonomy
Representative gene: GCF_003437665#DXC87_RS12830
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_003457595
AssemblyASM345759v1 · Scaffoldhaploid
Genome composition3 533 904 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 89 · HK 49 · RR 39CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key