1 HisKA#1
124-192 aa · 69 aa · 19.3% of protein
Raw token
HisKA:124:0.0000000000145:192:69:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
CHR61_RS02930
Histidine kinase, Classic
Faecalibacterium prausnitzii · GCF_002550045
ClassHKTypeClassicLength358 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_002550045#CHR61_RS02930Stable P2CS identifier used across views.
GenomeGCF_002550045Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Faecalibacterium
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length358 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage178 / 358 aa (49.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa358 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
236-344 aa · 109 aa · 30.4% of protein
Raw token
HATPase_c:236:3.3e-28:344:109:109- Raw architecture: HisKA:124:0.0000000000145:192:69:64#HATPase_c:236:3.3e-28:344:109:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_002550045::NZ_NOUW01000009.1::G00026
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span26789-28580Genomic interval covered by the local TCS group.
Identifiers
Old locus tagCHR61_02905RefSeq proteinWP_097770171.1
Context group ID
GCF_002550045::NZ_NOUW01000009.1::G00026Context members
CHR61_RS02930CHR61_RS02935
Partner locus tags
CHR61_RS02930CHR61_RS02935
Partner old locus tags
CHR61_02905CHR61_02910
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_097770171.1Primary protein accession used for annex mappings.
UniProt accessionA0A2A7BFZ7Primary UniProt accession resolved in the annex database.
UniProt IDA0A2A7BFZ7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed3 / 1Unique GO terms and literature references available below.
Reference hubs
GO terms
PubMed
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagCHR61_RS02930Primary locus identifier stored in the genes table.
Old locus tagCHR61_02905Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_NOUW01000009.1Sequence record reported by the local genomic context database.
Genomic interval26 789-27 865 nt1 077 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span26 789-28 580 ntGCF_002550045::NZ_NOUW01000009.1::G00026
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_002550045::NZ_NOUW01000009.1::G00026Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_NOUW01000009.1All displayed genes belong to this local TCS context.
Neighborhood span26 789-28 580 nt1 792 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
26 789 nt28 580 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
CHR61_RS02930GCF_002550045#CHR61_RS02930
HKClassicCurrent focus
26 789-27 865 nt · Forward (+)
CHR61_RS02935GCF_002550045#CHR61_RS02935
RROmpR
27 855-28 580 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_002550045#CHR61_RS02930The current gene is the representative for this cluster.
PFAM architectureDUF4118 + HisKA + HATPase_c3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2759954
Simplified PFAM architecture for HKOC_2759954
PFAM domain coverage: 283 / 358 aa (79.1%)
1 aa358 aa
DUF4118HisKAHATPase_c
- Simplified architecture: DUF4118 + HisKA + HATPase_c
- Raw architecture: DUF4118[12-116] | HisKA[125-192] | HATPase_c[237-346]
- Domain count: 3
- Matched identifier: HKOC_2759954
- Positioned domains: DUF4118 12-116 ; HisKA 125-192 ; HATPase_c 237-346
Cluster members and taxonomy
Representative gene: GCF_002550045#CHR61_RS02930
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 853 · GCF_002550045
AssemblyASM255004v1 · Contighaploid
Genome composition2 879 169 bp · 57,0% GCFaecalibacterium prausnitzii
Signal transduction countsGenes 46 · HK 21 · RR 24CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderEubacterialesFamilyOscillospiraceaeGenusFaecalibacterium
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Eubacteriales6Oscillospiraceae7Faecalibacterium
Related genes
Preview from the same derived genome key