1 HisKA#1
124-170 aa · 47 aa · 14.4% of protein
Raw token
HisKA:124:0.00000864:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
A9L49_RS09500
Histidine kinase, Classic
Bacillus cereus · GCF_001678165
ClassHKTypeClassicLength327 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001678165#A9L49_RS09500Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length327 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 327 aa (47.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa327 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.0% of protein
Raw token
HATPase_c:217:1.59e-27:324:108:109- Raw architecture: HisKA:124:0.00000864:170:53:64#HATPase_c:217:1.59e-27:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001678165::NZ_LYVD01000007.1::G00031
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span209252-210939Genomic interval covered by the local TCS group.
Identifiers
Old locus tagA9L49_12835RefSeq proteinWP_002094028.1
Context group ID
GCF_001678165::NZ_LYVD01000007.1::G00031Context members
A9L49_RS09495A9L49_RS09500
Partner locus tags
A9L49_RS09495A9L49_RS09500
Partner old locus tags
A9L49_12830A9L49_12835
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_002094028.1Primary protein accession used for annex mappings.
UniProt accessionA0AAN5XQM9Primary UniProt accession resolved in the annex database.
UniProt IDA0AAN5XQM9_BACCEDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagA9L49_RS09500Primary locus identifier stored in the genes table.
Old locus tagA9L49_12835Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_LYVD01000007.1Sequence record reported by the local genomic context database.
Genomic interval209 956-210 939 nt984 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span209 252-210 939 ntGCF_001678165::NZ_LYVD01000007.1::G00031
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001678165::NZ_LYVD01000007.1::G00031Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_LYVD01000007.1All displayed genes belong to this local TCS context.
Neighborhood span209 252-210 939 nt1 688 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
209 252 nt210 939 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
A9L49_RS09495GCF_001678165#A9L49_RS09495
RROmpR
209 252-209 959 nt · Forward (+)
A9L49_RS09500GCF_001678165#A9L49_RS09500
HKClassicCurrent focus
209 956-210 939 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000291035#ICE_RS09045Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2861317
Simplified PFAM architecture for HKOC_2861317
PFAM domain coverage: 108 / 327 aa (33.0%)
1 aa327 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-324]
- Domain count: 1
- Matched identifier: HKOC_2861317
- Positioned domains: HATPase_c 217-324
Cluster members and taxonomy
Representative gene: GCF_000291035#ICE_RS09045
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 396 · GCF_001678165
AssemblyASM167816v1 · Scaffoldhaploid
Genome composition6 404 077 bp · 35,0% GCBacillus cereus
Signal transduction countsGenes 116 · HK 63 · RR 52CheA 1 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key