1 HisKA#1
337-403 aa · 67 aa · 9.3% of protein
Raw token
HisKA:337:0.000000000000241:403:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA30_RS15265
Histidine kinase, Hybrid
Anaerostipes hadrus · GCF_001405635
ClassHKTypeHybridLength718 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_001405635#ARA30_RS15265Stable P2CS identifier used across views.
GenomeGCF_001405635Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Anaerostipes
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length718 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage303 / 718 aa (42.2%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa718 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
450-567 aa · 118 aa · 16.4% of protein
Raw token
HATPase_c:450:1.3e-26:567:118:1093 Response_reg#3
591-708 aa · 118 aa · 16.4% of protein
Raw token
Response_reg:591:6.79e-30:708:118:111- Raw architecture: HisKA:337:0.000000000000241:403:67:64#HATPase_c:450:1.3e-26:567:118:109#Response_reg:591:6.79e-30:708:118:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_001405635::NZ_CYXY01000009.1::G00017
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span49727-51883Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852571_01704RefSeq proteinWP_070099298.1
Context group ID
GCF_001405635::NZ_CYXY01000009.1::G00017Context members
ARA30_RS15265
Partner locus tags
ARA30_RS15265
Partner old locus tags
ERS852571_01704
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_070099298.1Primary protein accession used for annex mappings.
UniProt accessionA0A173T2Y0Primary UniProt accession resolved in the annex database.
UniProt IDA0A173T2Y0_ANAHADisplay identifier provided by UniProt.
GO / PubMed1 / 0Unique GO terms and literature references available below.
Reference hubs
GO terms
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA30_RS15265Primary locus identifier stored in the genes table.
Old locus tagERS852571_01704Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CYXY01000009.1Sequence record reported by the local genomic context database.
Genomic interval49 727-51 883 nt2 157 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span49 727-51 883 ntGCF_001405635::NZ_CYXY01000009.1::G00017
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001405635::NZ_CYXY01000009.1::G00017Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CYXY01000009.1All displayed genes belong to this local TCS context.
Neighborhood span49 727-51 883 nt2 157 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
49 727 nt51 883 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ARA30_RS15265GCF_001405635#ARA30_RS15265
HKHybridCurrent focus
49 727-51 883 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001405635#ARA30_RS15265The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0736414
Simplified PFAM architecture for HKOC_0736414
PFAM domain coverage: 300 / 718 aa (41.8%)
1 aa718 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[337-403] | HATPase_c[451-566] | Response_reg[591-707]
- Domain count: 3
- Matched identifier: HKOC_0736414
- Positioned domains: HisKA 337-403 ; HATPase_c 451-566 ; Response_reg 591-707
Cluster members and taxonomy
Representative gene: GCF_001405635#ARA30_RS15265
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 649 756 · GCF_001405635
Assembly14207_7#82 · Scaffoldhaploid
Genome composition3 159 004 bp · 37,0% GCAnaerostipes hadrus
Signal transduction countsGenes 49 · HK 23 · RR 24CheA 0 · PP 2
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusAnaerostipes
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Anaerostipes
Related genes
Preview from the same derived genome key