1 HisKA#1
129-174 aa · 46 aa · 13.6% of protein
Raw token
HisKA:129:0.0000706:174:52:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA06_RS00010
Histidine kinase, Classic
Blautia obeum · GCF_001405215
ClassHKTypeClassicLength337 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001405215#ARA06_RS00010Stable P2CS identifier used across views.
GenomeGCF_001405215Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length337 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage152 / 337 aa (45.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa337 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-326 aa · 106 aa · 31.5% of protein
Raw token
HATPase_c:221:8.07e-17:326:107:109- Raw architecture: HisKA:129:0.0000706:174:52:64#HATPase_c:221:8.07e-17:326:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001405215::NZ_CZBA01000001.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span156-1834Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852533_00002RefSeq proteinWP_055055116.1
Context group ID
GCF_001405215::NZ_CZBA01000001.1::G00001Context members
ARA06_RS00005ARA06_RS00010
Partner locus tags
ARA06_RS00005ARA06_RS00010
Partner old locus tags
ERS852533_00001ERS852533_00002
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055055116.1Primary protein accession used for annex mappings.
UniProt accessionA0A174JXP7Primary UniProt accession resolved in the annex database.
UniProt IDA0A174JXP7_9FIRMDisplay identifier provided by UniProt.
GO / PubMed6 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA06_RS00010Primary locus identifier stored in the genes table.
Old locus tagERS852533_00002Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CZBA01000001.1Sequence record reported by the local genomic context database.
Genomic interval821-1 834 nt1 014 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span156-1 834 ntGCF_001405215::NZ_CZBA01000001.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001405215::NZ_CZBA01000001.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CZBA01000001.1All displayed genes belong to this local TCS context.
Neighborhood span156-1 834 nt1 679 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
156 nt1 834 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ARA06_RS00005GCF_001405215#ARA06_RS00005
RROmpR
156-824 nt · Forward (+)
ARA06_RS00010GCF_001405215#ARA06_RS00010
HKClassicCurrent focus
821-1 834 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001404875#ARA07_RS15600Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2844545
Simplified PFAM architecture for HKOC_2844545
PFAM domain coverage: 107 / 337 aa (31.8%)
1 aa337 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[221-327]
- Domain count: 1
- Matched identifier: HKOC_2844545
- Positioned domains: HATPase_c 221-327
Cluster members and taxonomy
Representative gene: GCF_001404875#ARA07_RS15600
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 40 520 · GCF_001405215
Assembly14207_7#44 · Scaffoldhaploid
Genome composition3 904 077 bp · 41,5% GCBlautia obeum
Signal transduction countsGenes 114 · HK 60 · RR 53CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key