1 HisKA#1
124-170 aa · 47 aa · 14.5% of protein
Raw token
HisKA:124:0.00000899:170:53:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
EBGED10_RS13050
Histidine kinase, Classic
Bacillus sp. GeD10 · GCF_000382845
ClassHKTypeClassicLength324 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000382845#EBGED10_RS13050Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length324 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage155 / 324 aa (47.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa324 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
217-324 aa · 108 aa · 33.3% of protein
Raw token
HATPase_c:217:4.63e-29:324:108:109- Raw architecture: HisKA:124:0.00000899:170:53:64#HATPase_c:217:4.63e-29:324:108:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000382845::NZ_CAVI010000148.1::G00032
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span4495-6173Genomic interval covered by the local TCS group.
Identifiers
Old locus tagEBGED10_26110RefSeq proteinWP_033692331.1
Context group ID
GCF_000382845::NZ_CAVI010000148.1::G00032Context members
EBGED10_RS13045EBGED10_RS13050
Partner locus tags
EBGED10_RS13045EBGED10_RS13050
Partner old locus tags
EBGED10_26100EBGED10_26110
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_033692331.1Primary protein accession used for annex mappings.
UniProt accessionA0A9X0GAA8Primary UniProt accession resolved in the annex database.
UniProt IDA0A9X0GAA8_BACCEDisplay identifier provided by UniProt.
GO / PubMed5 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagEBGED10_RS13050Primary locus identifier stored in the genes table.
Old locus tagEBGED10_26110Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CAVI010000148.1Sequence record reported by the local genomic context database.
Genomic interval5 199-6 173 nt975 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span4 495-6 173 ntGCF_000382845::NZ_CAVI010000148.1::G00032
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000382845::NZ_CAVI010000148.1::G00032Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CAVI010000148.1All displayed genes belong to this local TCS context.
Neighborhood span4 495-6 173 nt1 679 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
4 495 nt6 173 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
EBGED10_RS13045GCF_000382845#EBGED10_RS13045
RROmpR
4 495-5 202 nt · Forward (+)
EBGED10_RS13050GCF_000382845#EBGED10_RS13050
HKClassicCurrent focus
5 199-6 173 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000382845#EBGED10_RS13050The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2865150
Simplified PFAM architecture for HKOC_2865150
PFAM domain coverage: 107 / 324 aa (33.0%)
1 aa324 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[217-323]
- Domain count: 1
- Matched identifier: HKOC_2865150
- Positioned domains: HATPase_c 217-323
Cluster members and taxonomy
Representative gene: GCF_000382845#EBGED10_RS13050
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 301 086 · GCF_000382845
AssemblyASM38284v1 · Scaffoldhaploid
Genome composition5 865 695 bp · 35,0% GCBacillus sp. GeD10
Signal transduction countsGenes 96 · HK 53 · RR 43CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key