1 HisKA_3#1
177-244 aa · 68 aa · 18.6% of protein
Raw token
HisKA_3:177:2.35e-19:244:68:68P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
IG1_RS10910
Histidine kinase, Classic
Bacillus cereus HD73 · GCF_000293685
ClassHKTypeClassicLength366 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_000293685#IG1_RS10910Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKA_3HATPase_c
Protein length366 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage145 / 366 aa (39.6%)Merged over positioned domains only.
Domain description1 HisKA_3,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa366 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
289-365 aa · 77 aa · 21.0% of protein
Raw token
HATPase_c:289:0.00000000105:365:97:109- Raw architecture: HisKA_3:177:2.35e-19:244:68:68#HATPase_c:289:0.00000000105:365:97:109
- Domain description: 1 HisKA_3,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_000293685::NZ_JH804651.1::G00026
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span266850-268593Genomic interval covered by the local TCS group.
Identifiers
Old locus tagIG1_02133RefSeq proteinWP_000397685.1
Context group ID
GCF_000293685::NZ_JH804651.1::G00026Context members
IG1_RS10910IG1_RS10915
Partner locus tags
IG1_RS10910IG1_RS10915
Partner old locus tags
IG1_02133IG1_02134
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_000397685.1Primary protein accession used for annex mappings.
UniProt accessionA0A9W5QIX0Primary UniProt accession resolved in the annex database.
UniProt IDA0A9W5QIX0_BACCEDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagIG1_RS10910Primary locus identifier stored in the genes table.
Old locus tagIG1_02133Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JH804651.1Sequence record reported by the local genomic context database.
Genomic interval266 850-267 950 nt1 101 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span266 850-268 593 ntGCF_000293685::NZ_JH804651.1::G00026
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_000293685::NZ_JH804651.1::G00026Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JH804651.1All displayed genes belong to this local TCS context.
Neighborhood span266 850-268 593 nt1 744 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
266 850 nt268 593 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
IG1_RS10910GCF_000293685#IG1_RS10910
HKClassicCurrent focus
266 850-267 950 nt · Reverse (-)
IG1_RS10915GCF_000293685#IG1_RS10915
RRNarL
267 955-268 593 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000161575#BTHUR0006_RS08530Use this link to inspect the representative gene detail.
PFAM architectureHisKA_31 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2711999
Simplified PFAM architecture for HKOC_2711999
PFAM domain coverage: 67 / 366 aa (18.3%)
1 aa366 aa
HisKA_3
- Simplified architecture: HisKA_3
- Raw architecture: HisKA_3[177-243]
- Domain count: 1
- Matched identifier: HKOC_2711999
- Positioned domains: HisKA_3 177-243
Cluster members and taxonomy
Representative gene: GCF_000161575#BTHUR0006_RS08530
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 053 200 · GCF_000293685
AssemblyBaci_cere_HD73_V1 · Scaffoldhaploid
Genome composition5 879 192 bp · 35,0% GCBacillus cereus HD73
Signal transduction countsGenes 100 · HK 54 · RR 46CheA 1 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key