1 HisKA#1
190-251 aa · 62 aa · 15.2% of protein
Raw token
HisKA:190:0.0000000000193:251:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACGHYF_RS01175
Histidine kinase, Classic
Anaerostipes hadrus · GCF_042855195
ClassHKTypeClassicLength407 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_042855195#ACGHYF_RS01175Stable P2CS identifier used across views.
GenomeGCF_042855195Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Anaerostipes
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length407 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 407 aa (42.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa407 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
297-406 aa · 110 aa · 27.0% of protein
Raw token
HATPase_c:297:1.78e-23:406:110:109- Raw architecture: HisKA:190:0.0000000000193:251:63:64#HATPase_c:297:1.78e-23:406:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_042855195::NZ_BAABXM010000001.1::G00004
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span225430-226653Genomic interval covered by the local TCS group.
Identifiers
Old locus tagF160043M1_02240RefSeq proteinWP_055159735.1
Context group ID
GCF_042855195::NZ_BAABXM010000001.1::G00004Context members
ACGHYF_RS01175
Partner locus tags
ACGHYF_RS01175
Partner old locus tags
F160043M1_02240
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055159735.1Primary protein accession used for annex mappings.
UniProt accessionA0A174MHK4Primary UniProt accession resolved in the annex database.
UniProt IDA0A174MHK4_ANAHADisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACGHYF_RS01175Primary locus identifier stored in the genes table.
Old locus tagF160043M1_02240Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_BAABXM010000001.1Sequence record reported by the local genomic context database.
Genomic interval225 430-226 653 nt1 224 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span225 430-226 653 ntGCF_042855195::NZ_BAABXM010000001.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_042855195::NZ_BAABXM010000001.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_BAABXM010000001.1All displayed genes belong to this local TCS context.
Neighborhood span225 430-226 653 nt1 224 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
225 430 nt226 653 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ACGHYF_RS01175GCF_042855195#ACGHYF_RS01175
HKClassicCurrent focus
225 430-226 653 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001404835#ARA33_RS05760Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2380608
Simplified PFAM architecture for HKOC_2380608
PFAM domain coverage: 169 / 407 aa (41.5%)
1 aa407 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[191-251] | HATPase_c[297-404]
- Domain count: 2
- Matched identifier: HKOC_2380608
- Positioned domains: HisKA 191-251 ; HATPase_c 297-404
Cluster members and taxonomy
Representative gene: GCF_001404835#ARA33_RS05760
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 649 756 · GCF_042855195
AssemblyASM4285519v1 · Contighaploid
Genome composition3 254 317 bp · 37,0% GCAnaerostipes hadrus
Signal transduction countsGenes 55 · HK 27 · RR 27CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusAnaerostipes
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Anaerostipes
Related genes
Preview from the same derived genome key