1 HisKA#1
190-251 aa · 62 aa · 15.2% of protein
Raw token
HisKA:190:0.0000000000193:251:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ARA33_RS05760
Histidine kinase, Classic
Anaerostipes hadrus · GCF_001404835
ClassHKTypeClassicLength407 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_001404835#ARA33_RS05760Stable P2CS identifier used across views.
GenomeGCF_001404835Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Anaerostipes
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length407 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage172 / 407 aa (42.3%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa407 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
297-406 aa · 110 aa · 27.0% of protein
Raw token
HATPase_c:297:1.78e-23:406:110:109- Raw architecture: HisKA:190:0.0000000000193:251:63:64#HATPase_c:297:1.78e-23:406:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_001404835::NZ_CZAU01000009.1::G00008
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span58261-60155Genomic interval covered by the local TCS group.
Identifiers
Old locus tagERS852520_01173RefSeq proteinWP_055159735.1
Context group ID
GCF_001404835::NZ_CZAU01000009.1::G00008Context members
ARA33_RS05760ARA33_RS05765
Partner locus tags
ARA33_RS05760ARA33_RS05765
Partner old locus tags
ERS852520_01173ERS852520_01174
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055159735.1Primary protein accession used for annex mappings.
UniProt accessionA0A174MHK4Primary UniProt accession resolved in the annex database.
UniProt IDA0A174MHK4_ANAHADisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagARA33_RS05760Primary locus identifier stored in the genes table.
Old locus tagERS852520_01173Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CZAU01000009.1Sequence record reported by the local genomic context database.
Genomic interval58 261-59 484 nt1 224 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span58 261-60 155 ntGCF_001404835::NZ_CZAU01000009.1::G00008
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_001404835::NZ_CZAU01000009.1::G00008Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CZAU01000009.1All displayed genes belong to this local TCS context.
Neighborhood span58 261-60 155 nt1 895 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
58 261 nt60 155 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
ARA33_RS05760GCF_001404835#ARA33_RS05760
HKClassicCurrent focus
58 261-59 484 nt · Reverse (-)
ARA33_RS05765GCF_001404835#ARA33_RS05765
RROmpR
59 481-60 155 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001404835#ARA33_RS05760The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2380608
Simplified PFAM architecture for HKOC_2380608
PFAM domain coverage: 169 / 407 aa (41.5%)
1 aa407 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[191-251] | HATPase_c[297-404]
- Domain count: 2
- Matched identifier: HKOC_2380608
- Positioned domains: HisKA 191-251 ; HATPase_c 297-404
Cluster members and taxonomy
Representative gene: GCF_001404835#ARA33_RS05760
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 649 756 · GCF_001404835
Assembly14207_7#31 · Scaffoldhaploid
Genome composition3 562 647 bp · 37,0% GCAnaerostipes hadrus
Signal transduction countsGenes 57 · HK 28 · RR 28CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusAnaerostipes
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Anaerostipes
Related genes
Preview from the same derived genome key