1 Response_reg#1
38-112 aa · 75 aa · 60.5% of protein
Raw token
Response_reg:38:0.000000108:112:80:111P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACGHAP_RS02555
Response regulator, CheY family
Blautia wexlerae · GCF_042847785
ClassRRTypeCheYLength124 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_042847785#ACGHAP_RS02555Stable P2CS identifier used across views.
GenomeGCF_042847785Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
Response_reg
Protein length124 aaLength used to scale native and Biotite-like views.
Annotated domains11 with usable coordinates.
Domain coverage75 / 124 aa (60.5%)Merged over positioned domains only.
Domain description1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa124 aa
Domain-by-domain annotation1 item
- Raw architecture: Response_reg:38:0.000000108:112:80:111
- Domain description: 1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_042847785::NZ_AP031426.1::G00006
Group size11 locus tag listed below.
HK / RR0 / 1Counts resolved for the local TCS neighborhood.
Context span545213-545587Genomic interval covered by the local TCS group.
Identifiers
Old locus tagI2200191F5_04630RefSeq proteinWP_195383065.1
Context group ID
GCF_042847785::NZ_AP031426.1::G00006Context members
ACGHAP_RS02555
Partner locus tags
ACGHAP_RS02555
Partner old locus tags
I2200191F5_04630
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_195383065.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACGHAP_RS02555Primary locus identifier stored in the genes table.
Old locus tagI2200191F5_04630Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_AP031426.1Sequence record reported by the local genomic context database.
Genomic interval545 213-545 587 nt375 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span545 213-545 587 ntGCF_042847785::NZ_AP031426.1::G00006
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_042847785::NZ_AP031426.1::G00006Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AP031426.1All displayed genes belong to this local TCS context.
Neighborhood span545 213-545 587 nt375 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
545 213 nt545 587 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ACGHAP_RS02555GCF_042847785#ACGHAP_RS02555
RRCheYCurrent focus
545 213-545 587 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015552855#I2D79_RS14675Use this link to inspect the representative gene detail.
PFAM architectureNo PFAM architecture availablePFAM architecture is attached when the local PFAM databases provide a match.
PFAM architecture for RROC_2386021
No PFAM cluster architecture is available for the current selection on this server.
Cluster members and taxonomy
Representative gene: GCF_015552855#I2D79_RS14675
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_042847785
AssemblyASM4284778v1 · Complete Genomehaploid
Genome composition4 644 539 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 150 · HK 71 · RR 76CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key