1 HisKA#1
14-76 aa · 63 aa · 27.8% of protein
Raw token
HisKA:14:0.0000000652:76:63:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
ACGHAP_RS01640
Histidine kinase, Classic
Blautia wexlerae · GCF_042847785
ClassHKTypeClassicLength227 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_042847785#ACGHAP_RS01640Stable P2CS identifier used across views.
GenomeGCF_042847785Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length227 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage170 / 227 aa (74.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa227 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
120-226 aa · 107 aa · 47.1% of protein
Raw token
HATPase_c:120:5.87e-29:226:110:109- Raw architecture: HisKA:14:0.0000000652:76:63:64#HATPase_c:120:5.87e-29:226:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_042847785::NZ_AP031426.1::G00004
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span365474-366157Genomic interval covered by the local TCS group.
Identifiers
Old locus tagI2200191F5_03070RefSeq proteinWP_177968494.1
Context group ID
GCF_042847785::NZ_AP031426.1::G00004Context members
ACGHAP_RS01640
Partner locus tags
ACGHAP_RS01640
Partner old locus tags
I2200191F5_03070
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_177968494.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagACGHAP_RS01640Primary locus identifier stored in the genes table.
Old locus tagI2200191F5_03070Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_AP031426.1Sequence record reported by the local genomic context database.
Genomic interval365 474-366 157 nt684 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span365 474-366 157 ntGCF_042847785::NZ_AP031426.1::G00004
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_042847785::NZ_AP031426.1::G00004Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_AP031426.1All displayed genes belong to this local TCS context.
Neighborhood span365 474-366 157 nt684 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
365 474 nt366 157 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
ACGHAP_RS01640GCF_042847785#ACGHAP_RS01640
HKClassicCurrent focus
365 474-366 157 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015550855#I2C60_RS06840Use this link to inspect the representative gene detail.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2926819
Simplified PFAM architecture for HKOC_2926819
PFAM domain coverage: 106 / 227 aa (46.7%)
1 aa227 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[120-225]
- Domain count: 1
- Matched identifier: HKOC_2926819
- Positioned domains: HATPase_c 120-225
Cluster members and taxonomy
Representative gene: GCF_015550855#I2C60_RS06840
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_042847785
AssemblyASM4284778v1 · Complete Genomehaploid
Genome composition4 644 539 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 150 · HK 71 · RR 76CheA 0 · PP 3
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key