1 His_kinase#1
374-451 aa · 78 aa · 13.4% of protein
Raw token
His_kinase:374:8.34e-25:451:79:80P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AB5791_RS06200
Histidine kinase, Classic
Blautia wexlerae · GCF_040926645
ClassHKTypeClassicLength583 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_040926645#AB5791_RS06200Stable P2CS identifier used across views.
GenomeGCF_040926645Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
His_kinaseHATPase_c
Protein length583 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage183 / 583 aa (31.4%)Merged over positioned domains only.
Domain description1 His_kinase,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa583 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
468-572 aa · 105 aa · 18.0% of protein
Raw token
HATPase_c:468:0.00000000074:572:110:109- Raw architecture: His_kinase:374:8.34e-25:451:79:80#HATPase_c:468:0.00000000074:572:110:109
- Domain description: 1 His_kinase,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_040926645::NZ_JBCOHQ010000017.1::G00026
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span39681-43024Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_040926645::NZ_JBCOHQ010000017.1::G00026Context members
AB5791_RS06195AB5791_RS06200
Partner locus tags
AB5791_RS06195AB5791_RS06200
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_368208442.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAB5791_RS06200Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JBCOHQ010000017.1Sequence record reported by the local genomic context database.
Genomic interval41 273-43 024 nt1 752 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span39 681-43 024 ntGCF_040926645::NZ_JBCOHQ010000017.1::G00026
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_040926645::NZ_JBCOHQ010000017.1::G00026Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBCOHQ010000017.1All displayed genes belong to this local TCS context.
Neighborhood span39 681-43 024 nt3 344 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
39 681 nt43 024 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AB5791_RS06195GCF_040926645#AB5791_RS06195
RRunclassified
39 681-41 270 nt · Reverse (-)
AB5791_RS06200GCF_040926645#AB5791_RS06200
HKClassicCurrent focus
41 273-43 024 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_040926645#AB5791_RS06200The current gene is the representative for this cluster.
PFAM architectureHis_kinase + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_1151509
Simplified PFAM architecture for HKOC_1151509
PFAM domain coverage: 182 / 583 aa (31.2%)
1 aa583 aa
His_kinaseHATPase_c
- Simplified architecture: His_kinase + HATPase_c
- Raw architecture: His_kinase[374-451] | HATPase_c[469-572]
- Domain count: 2
- Matched identifier: HKOC_1151509
- Positioned domains: His_kinase 374-451 ; HATPase_c 469-572
Cluster members and taxonomy
Representative gene: GCF_040926645#AB5791_RS06200
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_040926645
AssemblyASM4092664v1 · Scaffoldhaploid
Genome composition4 146 916 bp · 41,0% GCBlautia wexlerae
Signal transduction countsGenes 124 · HK 60 · RR 63CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key