1 HisKA#1
127-188 aa · 62 aa · 18.0% of protein
Raw token
HisKA:127:0.000000000919:188:62:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AAAT60_RS07615
Histidine kinase, Classic
Blautia wexlerae · GCF_040095395
ClassHKTypeClassicLength345 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_040095395#AAAT60_RS07615Stable P2CS identifier used across views.
GenomeGCF_040095395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length345 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage166 / 345 aa (48.1%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa345 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
234-337 aa · 104 aa · 30.1% of protein
Raw token
HATPase_c:234:6.86e-30:337:104:109- Raw architecture: HisKA:127:0.000000000919:188:62:64#HATPase_c:234:6.86e-30:337:104:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_040095395::NZ_JBBNFY010000013.1::G00002
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span45456-47188Genomic interval covered by the local TCS group.
Identifiers
Old locus tagAAAT60_07610RefSeq proteinWP_025581217.1
Context group ID
GCF_040095395::NZ_JBBNFY010000013.1::G00002Context members
AAAT60_RS07610AAAT60_RS07615
Partner locus tags
AAAT60_RS07610AAAT60_RS07615
Partner old locus tags
AAAT60_07605AAAT60_07610
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_025581217.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAAAT60_RS07615Primary locus identifier stored in the genes table.
Old locus tagAAAT60_07610Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBNFY010000013.1Sequence record reported by the local genomic context database.
Genomic interval46 151-47 188 nt1 038 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span45 456-47 188 ntGCF_040095395::NZ_JBBNFY010000013.1::G00002
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_040095395::NZ_JBBNFY010000013.1::G00002Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBNFY010000013.1All displayed genes belong to this local TCS context.
Neighborhood span45 456-47 188 nt1 733 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
45 456 nt47 188 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AAAT60_RS07610GCF_040095395#AAAT60_RS07610
RROmpR
45 456-46 142 nt · Forward (+)
AAAT60_RS07615GCF_040095395#AAAT60_RS07615
HKClassicCurrent focus
46 151-47 188 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_000484655#K316_RS0121620Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2819233
Simplified PFAM architecture for HKOC_2819233
PFAM domain coverage: 170 / 345 aa (49.3%)
1 aa345 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[125-188] | HATPase_c[234-339]
- Domain count: 2
- Matched identifier: HKOC_2819233
- Positioned domains: HisKA 125-188 ; HATPase_c 234-339
Cluster members and taxonomy
Representative gene: GCF_000484655#K316_RS0121620
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_040095395
AssemblyASM4009539v1 · Contighaploid
Genome composition4 140 334 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 120 · HK 58 · RR 61CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key