1 HisKA#1
670-736 aa · 67 aa · 7.5% of protein
Raw token
HisKA:670:0.00000000000000636:736:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
AAAT60_RS06435
Histidine kinase, Classic
Blautia wexlerae · GCF_040095395
ClassHKTypeClassicLength894 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_040095395#AAAT60_RS06435Stable P2CS identifier used across views.
GenomeGCF_040095395Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length894 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage160 / 894 aa (17.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa894 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
782-874 aa · 93 aa · 10.4% of protein
Raw token
HATPase_c:782:0.000000000166:874:97:109- Raw architecture: HisKA:670:0.00000000000000636:736:67:64#HATPase_c:782:0.000000000166:874:97:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_040095395::NZ_JBBNFY010000010.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span65243-68707Genomic interval covered by the local TCS group.
Identifiers
Old locus tagAAAT60_06425RefSeq proteinWP_349054680.1
Context group ID
GCF_040095395::NZ_JBBNFY010000010.1::G00001Context members
AAAT60_RS06435AAAT60_RS06440
Partner locus tags
AAAT60_RS06435AAAT60_RS06440
Partner old locus tags
AAAT60_06425AAAT60_06430
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_349054680.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagAAAT60_RS06435Primary locus identifier stored in the genes table.
Old locus tagAAAT60_06425Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JBBNFY010000010.1Sequence record reported by the local genomic context database.
Genomic interval65 243-67 927 nt2 685 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span65 243-68 707 ntGCF_040095395::NZ_JBBNFY010000010.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_040095395::NZ_JBBNFY010000010.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JBBNFY010000010.1All displayed genes belong to this local TCS context.
Neighborhood span65 243-68 707 nt3 465 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
65 243 nt68 707 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
AAAT60_RS06435GCF_040095395#AAAT60_RS06435
HKClassicCurrent focus
65 243-67 927 nt · Reverse (-)
AAAT60_RS06440GCF_040095395#AAAT60_RS06440
RROmpR
68 012-68 707 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_040095395#AAAT60_RS06435The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0423427
Simplified PFAM architecture for HKOC_0423427
PFAM domain coverage: 157 / 894 aa (17.6%)
1 aa894 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[671-735] | HATPase_c[783-874]
- Domain count: 2
- Matched identifier: HKOC_0423427
- Positioned domains: HisKA 671-735 ; HATPase_c 783-874
Cluster members and taxonomy
Representative gene: GCF_040095395#AAAT60_RS06435
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 418 240 · GCF_040095395
AssemblyASM4009539v1 · Contighaploid
Genome composition4 140 334 bp · 41,5% GCBlautia wexlerae
Signal transduction countsGenes 120 · HK 58 · RR 61CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key