1 HisKA#1
189-254 aa · 66 aa · 16.1% of protein
Raw token
HisKA:189:0.00000000000368:254:66:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
RO865_RS01155
Histidine kinase, Classic
Blautia faecis · GCF_032142815
ClassHKTypeClassicLength411 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_032142815#RO865_RS01155Stable P2CS identifier used across views.
GenomeGCF_032142815Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length411 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage170 / 411 aa (41.4%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa411 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
300-403 aa · 104 aa · 25.3% of protein
Raw token
HATPase_c:300:5.93e-27:403:104:109- Raw architecture: HisKA:189:0.00000000000368:254:66:64#HATPase_c:300:5.93e-27:403:104:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_032142815::NZ_JAVSND010000001.1::G00003
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span225508-227431Genomic interval covered by the local TCS group.
Identifiers
Old locus tagRO865_01155RefSeq proteinWP_313717897.1
Context group ID
GCF_032142815::NZ_JAVSND010000001.1::G00003Context members
RO865_RS01155RO865_RS01160
Partner locus tags
RO865_RS01155RO865_RS01160
Partner old locus tags
RO865_01155RO865_01160
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_313717897.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagRO865_RS01155Primary locus identifier stored in the genes table.
Old locus tagRO865_01155Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAVSND010000001.1Sequence record reported by the local genomic context database.
Genomic interval225 508-226 743 nt1 236 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span225 508-227 431 ntGCF_032142815::NZ_JAVSND010000001.1::G00003
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_032142815::NZ_JAVSND010000001.1::G00003Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAVSND010000001.1All displayed genes belong to this local TCS context.
Neighborhood span225 508-227 431 nt1 924 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
225 508 nt227 431 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
RO865_RS01155GCF_032142815#RO865_RS01155
HKClassicCurrent focus
225 508-226 743 nt · Reverse (-)
RO865_RS01160GCF_032142815#RO865_RS01160
RROmpR
226 748-227 431 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_032142815#RO865_RS01155The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2349785
Simplified PFAM architecture for HKOC_2349785
PFAM domain coverage: 171 / 411 aa (41.6%)
1 aa411 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[190-254] | HATPase_c[300-405]
- Domain count: 2
- Matched identifier: HKOC_2349785
- Positioned domains: HisKA 190-254 ; HATPase_c 300-405
Cluster members and taxonomy
Representative gene: GCF_032142815#RO865_RS01155
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_032142815
AssemblyASM3214281v1 · Scaffoldhaploid
Genome composition4 808 166 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 129 · HK 65 · RR 63CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key