1 HisKA#1
22-72 aa · 51 aa · 22.8% of protein
Raw token
HisKA:22:0.00000431:72:51:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
Q6Z71_RS01005
Histidine kinase, Classic
Blautia sp. · GCF_030840025
ClassHKTypeClassicLength224 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_030840025#Q6Z71_RS01005Stable P2CS identifier used across views.
GenomeGCF_030840025Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length224 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage154 / 224 aa (68.8%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa224 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
121-223 aa · 103 aa · 46.0% of protein
Raw token
HATPase_c:121:4.12e-31:223:106:109- Raw architecture: HisKA:22:0.00000431:72:51:64#HATPase_c:121:4.12e-31:223:106:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_030840025::NZ_JAUULE010000002.1::G00012
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span38876-39550Genomic interval covered by the local TCS group.
Identifiers
Context group ID
GCF_030840025::NZ_JAUULE010000002.1::G00012Context members
Q6Z71_RS01005
Partner locus tags
Q6Z71_RS01005
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_306557007.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagQ6Z71_RS01005Primary locus identifier stored in the genes table.
Old locus tagUnavailableNo previous locus tag available for this gene.
Contig / repliconNZ_JAUULE010000002.1Sequence record reported by the local genomic context database.
Genomic interval38 876-39 550 nt675 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span38 876-39 550 ntGCF_030840025::NZ_JAUULE010000002.1::G00012
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_030840025::NZ_JAUULE010000002.1::G00012Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAUULE010000002.1All displayed genes belong to this local TCS context.
Neighborhood span38 876-39 550 nt675 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
38 876 nt39 550 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
Q6Z71_RS01005GCF_030840025#Q6Z71_RS01005
HKClassicCurrent focus
38 876-39 550 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_030840025#Q6Z71_RS01005The current gene is the representative for this cluster.
PFAM architectureHATPase_c1 domain in the representative PFAM annotation.
PFAM architecture for HKOC_2927649
Simplified PFAM architecture for HKOC_2927649
PFAM domain coverage: 103 / 224 aa (46.0%)
1 aa224 aa
HATPase_c
- Simplified architecture: HATPase_c
- Raw architecture: HATPase_c[121-223]
- Domain count: 1
- Matched identifier: HKOC_2927649
- Positioned domains: HATPase_c 121-223
Cluster members and taxonomy
Representative gene: GCF_030840025#Q6Z71_RS01005
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 1 955 243 · GCF_030840025
AssemblyASM3084002v1 · Contighaploid
Genome composition2 847 585 bp · 45,0% GCBlautia sp.
Signal transduction countsGenes 55 · HK 26 · RR 29CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key