1 HisKA#1
108-174 aa · 67 aa · 19.9% of protein
Raw token
HisKA:108:0.00000000000000174:174:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
MN033_RS00035
Histidine kinase, Classic
Bacillus nitratireducens · GCF_022691145
ClassHKTypeClassicLength337 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_022691145#MN033_RS00035Stable P2CS identifier used across views.
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length337 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage177 / 337 aa (52.5%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa337 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
221-330 aa · 110 aa · 32.6% of protein
Raw token
HATPase_c:221:3.34e-27:330:110:109- Raw architecture: HisKA:108:0.00000000000000174:174:67:64#HATPase_c:221:3.34e-27:330:110:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_022691145::NZ_CP093844.1::G00001
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span6248-7964Genomic interval covered by the local TCS group.
Identifiers
Old locus tagMN033_00035RefSeq proteinWP_044737435.1
Context group ID
GCF_022691145::NZ_CP093844.1::G00001Context members
MN033_RS00035MN033_RS00040
Partner locus tags
MN033_RS00035MN033_RS00040
Partner old locus tags
MN033_00035MN033_00040
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_044737435.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagMN033_RS00035Primary locus identifier stored in the genes table.
Old locus tagMN033_00035Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_CP093844.1Sequence record reported by the local genomic context database.
Genomic interval6 248-7 261 nt1 014 nt · Reverse (-)
StrandReverse (-)Strand sign follows the local context database convention.
Local TCS group span6 248-7 964 ntGCF_022691145::NZ_CP093844.1::G00001
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022691145::NZ_CP093844.1::G00001Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_CP093844.1All displayed genes belong to this local TCS context.
Neighborhood span6 248-7 964 nt1 717 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
6 248 nt7 964 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
MN033_RS00035GCF_022691145#MN033_RS00035
HKClassicCurrent focus
6 248-7 261 nt · Reverse (-)
MN033_RS00040GCF_022691145#MN033_RS00040
RROmpR
7 251-7 964 nt · Reverse (-)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_022691145#MN033_RS00035The current gene is the representative for this cluster.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2845485
Simplified PFAM architecture for HKOC_2845485
PFAM domain coverage: 177 / 337 aa (52.5%)
1 aa337 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[108-174] | HATPase_c[222-331]
- Domain count: 2
- Matched identifier: HKOC_2845485
- Positioned domains: HisKA 108-174 ; HATPase_c 222-331
Cluster members and taxonomy
Representative gene: GCF_022691145#MN033_RS00035
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 2 026 193 · GCF_022691145
AssemblyASM2269114v1 · Chromosomehaploid
Genome composition5 056 959 bp · 35,5% GCBacillus nitratireducens
Signal transduction countsGenes 99 · HK 55 · RR 44CheA 0 · PP 0
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassBacilliOrderBacillalesFamilyBacillaceaeGenusBacillus
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Bacilli5Bacillales6Bacillaceae7Bacillus
Related genes
Preview from the same derived genome key