1 HisKA#1
345-411 aa · 67 aa · 9.2% of protein
Raw token
HisKA:345:0.0000000000000185:411:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
L0P07_RS12705
Histidine kinase, Hybrid
Blautia faecis · GCF_022136745
ClassHKTypeHybridLength732 aaTM0ValidatedNoCompleteYesContextorphan
Gene IDGCF_022136745#L0P07_RS12705Stable P2CS identifier used across views.
GenomeGCF_022136745Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_cResponse_reg
Protein length732 aaLength used to scale native and Biotite-like views.
Annotated domains33 with usable coordinates.
Domain coverage298 / 732 aa (40.7%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_c,1 Response_regSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa732 aa
Domain-by-domain annotation3 items
2 HATPase_c#2
463-576 aa · 114 aa · 15.6% of protein
Raw token
HATPase_c:463:2.34e-26:576:114:1093 Response_reg#3
599-715 aa · 117 aa · 16.0% of protein
Raw token
Response_reg:599:7.02e-31:715:117:111- Raw architecture: HisKA:345:0.0000000000000185:411:67:64#HATPase_c:463:2.34e-26:576:114:109#Response_reg:599:7.02e-31:715:117:111
- Domain description: 1 HisKA,1 HATPase_c,1 Response_reg
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelorphanGCF_022136745::NZ_JAKNFE010000026.1::G00035
Group size11 locus tag listed below.
HK / RR1 / 0Counts resolved for the local TCS neighborhood.
Context span47483-49681Genomic interval covered by the local TCS group.
Identifiers
Old locus tagL0P07_12700RefSeq proteinWP_195982956.1
Context group ID
GCF_022136745::NZ_JAKNFE010000026.1::G00035Context members
L0P07_RS12705
Partner locus tags
L0P07_RS12705
Partner old locus tags
L0P07_12700
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
No UniProt / GO / PubMed mapping was found for WP_195982956.1.
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagL0P07_RS12705Primary locus identifier stored in the genes table.
Old locus tagL0P07_12700Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAKNFE010000026.1Sequence record reported by the local genomic context database.
Genomic interval47 483-49 681 nt2 199 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span47 483-49 681 ntGCF_022136745::NZ_JAKNFE010000026.1::G00035
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022136745::NZ_JAKNFE010000026.1::G00035Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelorphanNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAKNFE010000026.1All displayed genes belong to this local TCS context.
Neighborhood span47 483-49 681 nt2 199 nt
Members11 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
47 483 nt49 681 nt
Neighborhood gene cards
1 gene in the current local neighborhood.
L0P07_RS12705GCF_022136745#L0P07_RS12705
HKHybridCurrent focus
47 483-49 681 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_015669355#I4V83_RS07505Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c + Response_reg3 domains in the representative PFAM annotation.
PFAM architecture for HKOC_0709214
Simplified PFAM architecture for HKOC_0709214
PFAM domain coverage: 297 / 732 aa (40.6%)
1 aa732 aa
HisKAHATPase_cResponse_reg
- Simplified architecture: HisKA + HATPase_c + Response_reg
- Raw architecture: HisKA[345-411] | HATPase_c[463-575] | Response_reg[599-715]
- Domain count: 3
- Matched identifier: HKOC_0709214
- Positioned domains: HisKA 345-411 ; HATPase_c 463-575 ; Response_reg 599-715
Cluster members and taxonomy
Representative gene: GCF_015669355#I4V83_RS07505
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_022136745
AssemblyContighaploid
Genome composition4 270 763 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 137 · HK 70 · RR 66CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key