1 HisKA#1
123-189 aa · 67 aa · 19.6% of protein
Raw token
HisKA:123:0.0000000326:189:67:64P2CS-Web
Two-component systems, rebuilt for exploration
Gene detail
L0P07_RS04725
Histidine kinase, Classic
Blautia faecis · GCF_022136745
ClassHKTypeClassicLength342 aaTM0ValidatedNoCompleteYesContextpaired
Gene IDGCF_022136745#L0P07_RS04725Stable P2CS identifier used across views.
GenomeGCF_022136745Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia
Domain signature
Compact overview inferred from the domain field
HisKAHATPase_c
Protein length342 aaLength used to scale native and Biotite-like views.
Annotated domains22 with usable coordinates.
Domain coverage174 / 342 aa (50.9%)Merged over positioned domains only.
Domain description1 HisKA,1 HATPase_cSummary string stored in the genes table.
Signal peptideUnavailableNo TMPRED prediction file matched this gene.
Transmembrane helicesUnavailableConfigure [protein_features] tmpred_root_dir to enable this annotation.
Complete domain annotations
Native P2CS viewFrontend rendering from the parsed domain string and TMPRED protein features.
1 aa342 aa
Domain-by-domain annotation2 items
2 HATPase_c#2
235-341 aa · 107 aa · 31.3% of protein
Raw token
HATPase_c:235:2.16e-27:341:107:109- Raw architecture: HisKA:123:0.0000000326:189:67:64#HATPase_c:235:2.16e-27:341:107:109
- Domain description: 1 HisKA,1 HATPase_c
- TM description: N/A
- TMPRED source: No TMPRED file loaded
- TMPRED segments: N/A
- Complete: Yes
Context mapping
Resolved via p2cs_tcs_context.db when a locus tag match exists
Context labelpairedGCF_022136745::NZ_JAKNFE010000006.1::G00058
Group size22 locus tags listed below.
HK / RR1 / 1Counts resolved for the local TCS neighborhood.
Context span18002-19716Genomic interval covered by the local TCS group.
Identifiers
Old locus tagL0P07_04720RefSeq proteinWP_055172811.1
Context group ID
GCF_022136745::NZ_JAKNFE010000006.1::G00058Context members
L0P07_RS04720L0P07_RS04725
Partner locus tags
L0P07_RS04720L0P07_RS04725
Partner old locus tags
L0P07_04715L0P07_04720
Partner protein IDs
External references
Resolved via p2cs_annexes.db when the RefSeq protein is present in the annex table
RefSeqWP_055172811.1Primary protein accession used for annex mappings.
UniProt accessionA0A174ZV01Primary UniProt accession resolved in the annex database.
UniProt IDA0A174ZV01_9FIRMDisplay identifier provided by UniProt.
GO / PubMed4 / 0Unique GO terms and literature references available below.
Reference hubs
Genomic coordinates
Resolved via p2cs_tcs_context.db when the current locus tag is present in the local context table
Current locus tagL0P07_RS04725Primary locus identifier stored in the genes table.
Old locus tagL0P07_04720Legacy locus tag recovered from the local context mapping.
Contig / repliconNZ_JAKNFE010000006.1Sequence record reported by the local genomic context database.
Genomic interval18 688-19 716 nt1 029 nt · Forward (+)
StrandForward (+)Strand sign follows the local context database convention.
Local TCS group span18 002-19 716 ntGCF_022136745::NZ_JAKNFE010000006.1::G00058
Quick actions
Local neighborhood
Graphical neighborhood resolved from the local TCS context group on the current contig
GCF_022136745::NZ_JAKNFE010000006.1::G00058Graphic view
Compact keeps a quick overview. Biotite-like switches to a coordinate-aware biological layout with strand and zoom.
Context labelpairedNeighborhood members are ordered by genomic coordinates.
Contig / repliconNZ_JAKNFE010000006.1All displayed genes belong to this local TCS context.
Neighborhood span18 002-19 716 nt1 715 nt
Members21 current focus gene
Local TCS group mapArrow direction follows strand. The current gene is highlighted with a stronger outline.
18 002 nt19 716 nt
Neighborhood gene cards
2 genes in the current local neighborhood.
L0P07_RS04720GCF_022136745#L0P07_RS04720
RROmpR
18 002-18 691 nt · Forward (+)
L0P07_RS04725GCF_022136745#L0P07_RS04725
HKClassicCurrent focus
18 688-19 716 nt · Forward (+)
Clusters
CD-HIT memberships and selected cluster details for the current gene class
Available memberships1 cluster
Representative sequenceGCF_001406755#ARA59_RS10170Use this link to inspect the representative gene detail.
PFAM architectureHisKA + HATPase_c2 domains in the representative PFAM annotation.
PFAM architecture for HKOC_2831831
Simplified PFAM architecture for HKOC_2831831
PFAM domain coverage: 172 / 342 aa (50.3%)
1 aa342 aa
HisKAHATPase_c
- Simplified architecture: HisKA + HATPase_c
- Raw architecture: HisKA[125-189] | HATPase_c[235-341]
- Domain count: 2
- Matched identifier: HKOC_2831831
- Positioned domains: HisKA 125-189 ; HATPase_c 235-341
Cluster members and taxonomy
Representative gene: GCF_001406755#ARA59_RS10170
Sankey plot built from the taxonomy of all members in the selected cluster.
Genome taxonomy
Unknown
Taxonomy recordUnknownTaxon ID 871 665 · GCF_022136745
AssemblyContighaploid
Genome composition4 270 763 bp · 42,5% GCBlautia faecis
Signal transduction countsGenes 137 · HK 70 · RR 66CheA 0 · PP 1
Ranked taxonomy7 ranked levels available
SuperkingdomBacteriaKingdomBacillatiPhylumBacillotaClassClostridiaOrderLachnospiralesFamilyLachnospiraceaeGenusBlautia
Lineage path7 lineage nodes
1Bacteria2Bacillati3Bacillota4Clostridia5Lachnospirales6Lachnospiraceae7Blautia
Related genes
Preview from the same derived genome key